TDRKH

TDRKH

Available structures

Ortholog search: PDBe RCSB

List of PDB id codes
2DIQ, 3FDR, 5J39

Identifiers

TDRKH, TDRD2, tudor and KH domain containing

External IDs

MGI: 1919884 HomoloGene: 4999 GeneCards: TDRKH

Gene location (Human)

Chr.	Chromosome 1 (human)^[1]

Band	No data available	Start	151,770,107 bp^[1]
Band	No data available	End	151,791,416 bp^[1]

Gene location (Mouse)

Chr.	Chromosome 3 (mouse)^[2]

Band	No data available	Start	94,413,273 bp^[2]
Band	No data available	End	94,434,668 bp^[2]

RNA expression pattern

More reference expression data

Gene ontology
Molecular function	• RNA binding • nucleic acid binding
Cellular component	• cytoplasm • pi-body • mitochondrion • piP-body
Biological process	• male meiotic nuclear division • fertilization • cell differentiation • DNA methylation involved in gamete generation • spermatogenesis • gene silencing by RNA • piRNA metabolic process
Sources:Amigo / QuickGO

Orthologs

Species

Human

Mouse


11022


72634


ENSG00000182134


ENSMUSG00000041912


Q9Y2W6


Q80VL1

RefSeq (mRNA)


NM_001083963 NM_001083964 NM_001083965 NM_006862


NM_028307

RefSeq (protein)


NP_001077432 NP_001077433 NP_001077434 NP_006853


NP_082583

Location (UCSC)

Chr 1: 151.77 – 151.79 Mb

Chr 1: 94.41 – 94.43 Mb

PubMed search

^[3]

^[4]

View/Edit Human

View/Edit Mouse

Tudor and KH domain-containing protein is a protein that in humans is encoded by the TDRKH gene.^[5]^[6]

References

1 2 3 GRCh38: Ensembl release 89: ENSG00000182134 - Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000041912 - Ensembl, May 2017
↑ "Human PubMed Reference:".
↑ "Mouse PubMed Reference:".
↑ Lamb FS, Barna TJ, Goud C, Marenholz I, Mischke D, Schutte BC (May 2000). "Complex RNA processing of TDRKH, a novel gene encoding the putative RNA-binding tudor and KH domains". Gene. 246 (1-2): 209–18. PMID 10767542. doi:10.1016/S0378-1119(00)00087-1.
↑ "Entrez Gene: TDRKH tudor and KH domain containing".

Further reading

Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes.". Genome Res. 16 (1): 55–65. PMC 1356129 . PMID 16344560. doi:10.1101/gr.4039406.
Côté J, Richard S (2005). "Tudor domains bind symmetrical dimethylated arginines.". J. Biol. Chem. 280 (31): 28476–83. PMID 15955813. doi:10.1074/jbc.M414328200.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).". Genome Res. 14 (10B): 2121–7. PMC 528928 . PMID 15489334. doi:10.1101/gr.2596504.
Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs.". Nat. Genet. 36 (1): 40–5. PMID 14702039. doi:10.1038/ng1285.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. PMC 139241 . PMID 12477932. doi:10.1073/pnas.242603899.
Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library.". Gene. 200 (1-2): 149–56. PMID 9373149. doi:10.1016/S0378-1119(97)00411-3.
Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides.". Gene. 138 (1-2): 171–4. PMID 8125298. doi:10.1016/0378-1119(94)90802-8.

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