SUPT20H

SUPT20H

Identifiers

SUPT20H, C13, C13orf19, FAM48A, P38IP, SPT20, FP757, SPT20 homolog, SAGA complex component

External IDs

HomoloGene: 133929 GeneCards: SUPT20H

Gene location (Human)

Chr.	Chromosome 13 (human)^[1]

Band	No data available	Start	37,009,312 bp^[1]
Band	No data available	End	37,059,713 bp^[1]

RNA expression pattern

More reference expression data

Gene ontology
Molecular function	• protein binding • transcription cofactor activity
Cellular component	• SAGA-type complex • SAGA complex • nucleus • fibrillar center
Biological process	• autophagy • multicellular organism development • gastrulation • regulation of nucleic acid-templated transcription
Sources:Amigo / QuickGO

Orthologs

Species

Human

Mouse


55578


n/a


ENSG00000102710


n/a


Q8NEM7


n/a

RefSeq (mRNA)


NM_001014286 NM_001278480 NM_001278481 NM_001278482 NM_017569


n/a

RefSeq (protein)


NP_001014308 NP_001265409 NP_001265410 NP_001265411 NP_060039


n/a

Location (UCSC)

Chr 13: 37.01 – 37.06 Mb

n/a

PubMed search

^[2]

n/a

View/Edit Human

SPT20 homolog is a protein that in humans is encoded by the SUPT20H gene.^[3]^[4]^[5]

References

1 2 3 GRCh38: Ensembl release 89: ENSG00000102710 - Ensembl, May 2017
↑ "Human PubMed Reference:".
↑ Gomes I, Sharma TT, Edassery S, Fulton N, Mar BG, Westbrook CA (Jun 2002). "Novel transcription factors in human CD34 antigen-positive hematopoietic cells". Blood. 100 (1): 107–19. PMID 12070015. doi:10.1182/blood.V100.1.107.
↑ Kunze D, Fuessel S, Meye A, Wirth MP, Schmidt U (May 2006). "Functional analyses of C13orf19/P38IP in prostate cell lines". Oncol Rep. 15 (6): 1599–604. PMID 16685401. doi:10.3892/or.15.6.1599.
↑ "Entrez Gene: FAM48A family with sequence similarity 48, member A".

Further reading

Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides.". Gene. 138 (1–2): 171–4. PMID 8125298. doi:10.1016/0378-1119(94)90802-8.
Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. PMID 9373149. doi:10.1016/S0378-1119(97)00411-3.
Schmidt U, Fiedler U, Pilarsky CP, et al. (2001). "Identification of a novel gene on chromosome 13 between BRCA-2 and RB-1". Prostate. 47 (2): 91–101. PMID 11340631. doi:10.1002/pros.1051.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. PMC 139241 . PMID 12477932. doi:10.1073/pnas.242603899.
Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. PMID 14702039. doi:10.1038/ng1285.
Dunham A, Matthews LH, Burton J, et al. (2004). "The DNA sequence and analysis of human chromosome 13". Nature. 428 (6982): 522–8. PMC 2665288 . PMID 15057823. doi:10.1038/nature02379.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. PMC 528928 . PMID 15489334. doi:10.1101/gr.2596504.
Wan D, Gong Y, Qin W, et al. (2004). "Large-scale cDNA transfection screening for genes related to cancer development and progression". Proc. Natl. Acad. Sci. U.S.A. 101 (44): 15724–9. PMC 524842 . PMID 15498874. doi:10.1073/pnas.0404089101.
Schmidt U, Fuessel S, Haase M, et al. (2005). "Quantification of C13orf19/P38IP mRNA expression by quantitative real-time PCR in patients with urological malignancies". Cancer Lett. 225 (2): 253–60. PMID 15978328. doi:10.1016/j.canlet.2004.10.037.
Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. PMC 1356129 . PMID 16344560. doi:10.1101/gr.4039406.
Lim J, Hao T, Shaw C, et al. (2006). "A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration". Cell. 125 (4): 801–14. PMID 16713569. doi:10.1016/j.cell.2006.03.032.
Zohn IE, Li Y, Skolnik EY, et al. (2006). "p38 and a p38-interacting protein are critical for downregulation of E-cadherin during mouse gastrulation". Cell. 125 (5): 957–69. PMID 16751104. doi:10.1016/j.cell.2006.03.048.

External links

FactorBook SPT20

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