SPATA7

SPATA7

Identifiers

SPATA7, HEL-S-296, HSD-3.1, HSD3, LCA3, spermatogenesis associated 7

External IDs

MGI: 2144877 HomoloGene: 10189 GeneCards: SPATA7

Gene location (Human)

Chr.	Chromosome 14 (human)^[1]

Band	No data available	Start	88,384,924 bp^[1]
Band	No data available	End	88,470,350 bp^[1]

Gene location (Mouse)

Chr.	Chromosome 12 (mouse)^[2]

Band	No data available	Start	98,628,157 bp^[2]
Band	No data available	End	98,669,815 bp^[2]

RNA expression pattern

More reference expression data

Gene ontology
Molecular function	• protein binding
Cellular component	• microtubule cytoskeleton • cytoskeleton • axoneme • cytoplasm • ciliary basal body • cell projection • photoreceptor connecting cilium • nucleoplasm • mitochondrion • cytosol
Biological process	• visual perception • response to stimulus • photoreceptor cell maintenance • protein localization to photoreceptor outer segment • protein localization to photoreceptor connecting cilium
Sources:Amigo / QuickGO

Orthologs

Species

Human

Mouse


55812


104871


ENSG00000042317


ENSMUSG00000021007


Q9P0W8


Q80VP2

RefSeq (mRNA)


NM_001040428 NM_018418


NM_001289572 NM_001289573 NM_001289574 NM_178914

RefSeq (protein)


NP_001035518 NP_060888


NP_001276501 NP_001276502 NP_001276503 NP_849245

Location (UCSC)

Chr 14: 88.38 – 88.47 Mb

Chr 14: 98.63 – 98.67 Mb

PubMed search

^[3]

^[4]

View/Edit Human

View/Edit Mouse

Spermatogenesis-associated protein 7 is a protein that in humans is encoded by the SPATA7 gene.^[5]

References

1 2 3 GRCh38: Ensembl release 89: ENSG00000042317 - Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000021007 - Ensembl, May 2017
↑ "Human PubMed Reference:".
↑ "Mouse PubMed Reference:".
↑ "Entrez Gene: SPATA7 spermatogenesis associated 7".

Further reading

Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides.". Gene. 138 (1-2): 171–4. PMID 8125298. doi:10.1016/0378-1119(94)90802-8.
Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library.". Gene. 200 (1-2): 149–56. PMID 9373149. doi:10.1016/S0378-1119(97)00411-3.
Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination.". Genome Res. 10 (11): 1788–95. PMC 310948 . PMID 11076863. doi:10.1101/gr.143000.
Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs.". Genome Res. 11 (3): 422–35. PMC 311072 . PMID 11230166. doi:10.1101/gr.GR1547R.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. PMC 139241 . PMID 12477932. doi:10.1073/pnas.242603899.
Heilig R, Eckenberg R, Petit JL, et al. (2003). "The DNA sequence and analysis of human chromosome 14.". Nature. 421 (6923): 601–7. PMID 12508121. doi:10.1038/nature01348.
Zhang X, Liu H, Zhang Y, et al. (2004). "A novel gene, RSD-3/HSD-3.1, encodes a meiotic-related protein expressed in rat and human testis.". J. Mol. Med. 81 (6): 380–7. PMID 12736779. doi:10.1007/s00109-003-0434-y.
Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs.". Nat. Genet. 36 (1): 40–5. PMID 14702039. doi:10.1038/ng1285.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).". Genome Res. 14 (10B): 2121–7. PMC 528928 . PMID 15489334. doi:10.1101/gr.2596504.
Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline.". Genome Res. 14 (10B): 2136–44. PMC 528930 . PMID 15489336. doi:10.1101/gr.2576704.
Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006.". Nucleic Acids Res. 34 (Database issue): D415–8. PMC 1347501 . PMID 16381901. doi:10.1093/nar/gkj139.

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