SLC6A15

SLC6A15
Identifiers
AliasesSLC6A15, NTT73, SBAT1, V7-3, hv7-3, solute carrier family 6 member 15
External IDsMGI: 2143484 HomoloGene: 18163 GeneCards: SLC6A15
Gene location (Human)
Chr.Chromosome 12 (human)[1]
BandNo data availableStart84,859,488 bp[1]
End84,913,615 bp[1]
Orthologs
SpeciesHumanMouse
Entrez

55117

103098

Ensembl

ENSG00000072041

ENSMUSG00000019894

UniProt

Q9H2J7

Q8BG16

RefSeq (mRNA)

NM_001146335
NM_018057
NM_182767

NM_001252330
NM_175328

RefSeq (protein)

NP_001139807
NP_060527
NP_877499

NP_001239259
NP_780537

Location (UCSC)Chr 12: 84.86 – 84.91 MbChr 12: 103.37 – 103.42 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Solute carrier family 6 member 15 (SLC6A15) also known as the sodium-dependent neutral amino acid transporter B(0)AT2 (B0AT2)' is a protein that in humans is encoded by the SLC6A15 gene.[5]

Function

SLC6A15 shows structural characteristics of an Na+ and Cl-dependent neurotransmitter transporter, including 12 transmembrane (TM) domains, intracellular N and C termini, and large extracellular loops containing multiple N-glycosylation sites.[6]

Clinical relevance

Variants of this gene linked with depression are associated with reduced SLC6A15 expression in the human hippocampus, as well as decreased volume of this brain region.[7]

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000072041 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000019894 - Ensembl, May 2017
  3. "Human PubMed Reference:".
  4. "Mouse PubMed Reference:".
  5. "Entrez Gene: solute carrier family 6 (neutral amino acid transporter)".
  6. Farmer MK, Robbins MJ, Medhurst AD, Campbell DA, Ellington K, Duckworth M, Brown AM, Middlemiss DN, Price GW, Pangalos MN (Dec 2000). "Cloning and characterization of human NTT5 and v7-3: two orphan transporters of the Na+/Cl- -dependent neurotransmitter transporter gene family". Genomics. 70 (2): 241–52. PMID 11112352. doi:10.1006/geno.2000.6387.
  7. Kohli MA, Lucae S, Saemann PG, Schmidt MV, Demirkan A, Hek K, Czamara D, Alexander M, Salyakina D, Ripke S, Hoehn D, Specht M, Menke A, Hennings J, Heck A, Wolf C, Ising M, Schreiber S, Czisch M, Müller MB, Uhr M, Bettecken T, Becker A, Schramm J, Rietschel M, Maier W, Bradley B, Ressler KJ, Nöthen MM, Cichon S, Craig IW, Breen G, Lewis CM, Hofman A, Tiemeier H, van Duijn CM, Holsboer F, Müller-Myhsok B, Binder EB (Apr 2011). "The neuronal transporter gene SLC6A15 confers risk to major depression". Neuron. 70 (2): 252–65. PMC 3112053Freely accessible. PMID 21521612. doi:10.1016/j.neuron.2011.04.005.

Further reading

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