List of autoimmune diseases

This list of autoimmune diseases is categorized by organ and tissue type to help locate diseases that may be similar.

Autoimmune Diseases Qualifiers

Overview of the qualifiers for the list.

Other Qualifiers
A	"Accepted" in prior version of this table
C	A disease, regarded as autoimmune, that is often found in individuals with another autoimmune condition. This designation is given to diseases that are classified by Rose Bona as having "circumstantial" evidence of autoimmune etiology. Diseases in this list with a "C" are, therefore, actual autoimmune diseases, rather than comorbid symptoms, which appear after this list.
E	Disease is an autoimmune response triggered by a specific environmental factor
F	Disease is only caused by autoimmunity in only a fraction of those who suffer from it
I	Described as an autoinflammatory disease
L	Evidence to indicate autoimmunity is extremely limited or circumstantial
M	Disease appears under Autoimmune Diseases in MeSH
N	Not listed in prior version of this table
R	Disease appeared in prior version but has been renamed. In renaming, precedence has been given to scientific names over those based on discoverers.
S	"Suspected" in the prior version of this table
T	Disease has a known trigger, such as viral infection, vaccination, or injury
X	An extremely rare disease, which would suggest limited opportunity to study it and conclusively determine whether it is caused by autoimmunity
Y	Listed in the prior version of this table with "Accepted/Suspected" left blank

Autoimmune Diseases

Major Organs

Organ/Tissue Type Disease Name	Level of Acceptance for Autoimmunity	Hypersensitivity (I,II,III,IV)	ICD-9 Codes	Notes/Autoantibodies/Synonyms/Rare Variants
Heart
Myocarditis^[1]^[2]	Moderate, F, R, A		391.2 422 429.0	Synonyms: Autoimmune myocarditis, Autoimmune cardiomyopathy, Coxsackie myocarditis
Postmyocardial infarction syndrome^[2]	Limited, R, Y		411.0	Autoantibodies: Myocardial neo-antigens formed as a result of the MI. Synonym: Dressler's syndrome
Postpericardiotomy syndrome	Limited, N		429.4
Subacute bacterial endocarditis (SBE)^[3]	Limited, Y	III	421.0	Autoantibodies: essential mixed cryoglobulinemia.
Kidney
Anti-Glomerular Basement Membrane nephritis^[4]	Moderate, R, M, A	II	446.21	Autoantibodies: Anti-Basement Membrane Collagen Type IV Protein. Synonyms: Goodpastures Syndrome, Glomerulonephritis Type 1
Interstitial cystitis^[5]	Limited, S		595.1	Mast cells.
Lupus nephritis	Comorbidity, N		583.81	A comorbidity of Systemic Lupus Erythematosus.
Liver
Autoimmune hepatitis^[6]^[7]^[8]	Moderate, A	cell-mediated	571.42	Autoantibodies: ANA and SMA, LKM-1, LKM-2 or LKM-3; antibodies against soluble liver antigen (anti-SLA, anti-LP) no autoantibodies detected (~20%)[citation needed]. Synonym: Lupoid hepatitis
Primary biliary cirrhosis (PBC)^[9]^[10]^[11]^[12]	Moderate, A		571.6	Autoantibodies: Anti-p62, Anti-sp100, Anti-Mitochondrial(M2), Anti-Ro aka SSA. Note that Sjogren's is classified in some places (e.g. MeSH) as rheumatoid disease, but there is no published evidence to support that classification.
Primary sclerosing cholangitis	Limited, Y		576.1	Possible overlap with primary biliary cirrhosis. Autoantibodies: HLA-DR52a.
Lung
Antisynthetase syndrome	Limited, Y		279.49
Skin
Alopecia Areata^[13]^[14]	Moderate, A		704.01	Autoantibodies: T-cells. Synonyms: Alopecia areata - Patchy, Totalis, Universalis
Autoimmune Angioedema^[15]^[16]	Limited, F, N		277.6 995.1
Autoimmune progesterone dermatitis	Limited, X, A		279.49
Autoimmune urticaria^[17]^[18]	Comorbidity, A		708
Bullous pemphigoid^[19]	Moderate, Y		694.5	Autoantibodies: IgG autoantibodies targeting the type XVII collagen component of hemidesmosomes.
Cicatricial pemphigoid	Limited, R, X, Y		694.61	precipitates C3. Autoantibodies: anti-BP-1, anti-BP-2. Synonyms: Benign Mucosal Pemphigoid, Ocular cicatricial pemphigoid
Dermatitis herpetiformis^[20]	Moderate, C, Y		694.0	Autoantibodies: IgA Eosinophilia; anti-epidermal transglutaminase antibodies.
Discoid lupus erythematosus^[21]	Limited, Y	III	695.4	IL-2 and IFN-gamma.
Epidermolysis bullosa acquisita	Moderate, Y		694.8	COL7A1.
Erythema nodosum	Limited, F, Y		695.2
Gestational pemphigoid	Limited, R, Y		646.8	Autoantibodies: IgG and C3 misdirected antibodies intended to protect the placenta.
Hidradenitis suppurativa^[22]	Limited, C, S		705.83
Lichen planus	Limited, Y		697.0
Lichen sclerosus	Limited, C, Y		701.0
Linear IgA disease (LAD)^[23]	Moderate, Y		646.8
Morphea^[24]	Limited, C, S		701.0
Pemphigus vulgaris^[4]^[20]	Moderate, M, A	II	694.4	Autoantibodies: Anti-Desmoglein 3 eosinophilia.
Pityriasis lichenoides et varioliformis acuta	Limited, C		696.2
Mucha-Habermann disease	Limited, C, Y		696.2	T-cells. Synonyms: Pityriasis lichenoides, varioliformis acuta
Psoriasis^[25]	Moderate, A	IV?	696	CD-8 T-cells, HLA-Cw6, IL-12b, IL-23b, TNFalpha, NF-κB.
Systemic scleroderma^[24]^[26]	Limited, R, S		710.1	COL1A2 and TGF-β1. Autoantibodies: Anti-nuclear antibodies, anti-centromere and anti-scl70/anti-topoisomerase antibodies. Synonyms: Diffuse cutaneous systemic sclerosis, Systemic sclerosis, Scleroderma
Vitiligo^[27]^[28]	Limited, C, S		709.01	NALP-1 RERE, PTPN22, LPP, IL2RA, GZMB, UBASH3A and C1QTNF6.

Glands

Organ/Tissue Type Disease Name	Level of Acceptance for Autoimmunity	Hypersensitivity (I,II,III,IV)	ICD-9 Codes	Notes/Autoantibodies/Synonyms/Rare Variants
Endocrine
Adrenal Gland
Addison's disease^[4]	Moderate, F, Y		255	Autoantibodies: 21 hydroxylase.
Multi-Glandular
Autoimmune polyendocrine syndrome (APS) type 1	Moderate, A	Unknown or multiple	258.1	Synonyms: Whitaker's Syndrome, Autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy (APECED), Addisons Disease, Polyglandular Autoimmune Syndrome 1 (PGAS-1).
Autoimmune polyendocrine syndrome (APS) type 2^[29]	Moderate, A		258.1	DQ2, DQ8 and DRB1*0404. Autoantibodies: anti-21 hydroxylase, anti-17 hydroxylase. Synonyms: Schmidt syndrome, Polyglandular Autoimmune Syndrome 2 (PGAS-2).
Autoimmune polyendocrine syndrome (APS) type 3	Moderate, A		258.1	Synonym: Polyglandular Autoimmune Syndrome 3 (PGAS-3).
Pancreas
Autoimmune pancreatitis (AIP)	Moderate, A		577.1	Autoantibodies: ANA, anti-lactoferrin antibodies, anti-carbonic anhydrase antibodies, rheumatoid factor.
Diabetes mellitus type 1^[4]	Moderate, A	IV	250.01	HLA-DR3, HLA-DR4. Autoantibodies: Glutamic acid decarboxylase antibodies (GADA), islet cell antibodies (ICA), insulinoma-associated autoantibodies (IA-2), anti-insulin antibodies.
Thyroid Gland
Autoimmune thyroiditis	Strong, A	IV	245.8	HLADR5, CTLA-4. Autoantibodies: Antibodies against thyroid peroxidase and/or thyroglobulin. Synonyms: Chronic lymphocytic thyroiditis, Hashimoto's thyroiditis.
Ord's thyroiditis	Moderate, Y		245.8
Graves' disease^[4]	Moderate, M, A	II	242.0	Autoantibodies: Thyroid autoantibodies (TSHR-Ab) that activate the TSH-receptor (TSHR).
Exocrine
Reproductive Organs
Autoimmune Oophoritis	Moderate, N		614.2
Endometriosis^[30]	Limited, S		617.0
Autoimmune orchitis	Limited, N		604.0
Salivary Glands
Sjogren's syndrome^[4]^[10]^[11]^[12]	Moderate, A		710.2	Autoantibodies: Anti-Ro (often present also in Systemic Lupus Erythematosus).

Digestive System

Organ/Tissue Type Disease Name	Level of Acceptance for Autoimmunity	Hypersensitivity (I,II,III,IV)	ICD-9 Codes	Notes/Autoantibodies/Synonyms/Rare Variants
Digestive System
Autoimmune enteropathy	Moderate, X, Y		{{{1}}}
Coeliac disease^[31]^[32]^[33]	Moderate, A,E	IV??	579.0	HLA-DQ8 and DQ2.5. Autoantibodies: Anti-tissue transglutaminase antibodies, anti-endomysial IgA, anti-gliadin IgA.
Crohn's disease^[34]	Moderate, Y	IV	555	Innate immunity; Th17; Th1; ATG16L1; CARD15; XBP1.
Microscopic colitis	Limited, S		558.9
Ulcerative colitis^[4]	Limited, A	IV	556

Tissue

Organ/Tissue Type Disease Name	Level of Acceptance for Autoimmunity	Hypersensitivity (I,II,III,IV)	ICD-9 Codes	Notes/Autoantibodies/Synonyms/Rare Variants
Blood
Antiphospholipid syndrome (APS, APLS)^[4]	Moderate, M, A		289.81	HLA-DR7, HLA-B8, HLA-DR2, HLA-DR3. Autoantibodies: Anti-cardiolipin; anti-pyruvate dehydrogenase; β2 glycoprotein I; phosphatidylserine; anti-apoH; Annexin A5. Synonym: Hughes syndrome.
Aplastic anemia	Limited, F, Y		284
Autoimmune hemolytic anemia	Moderate, M, A	II	283.0	Complement activation.
Autoimmune lymphoproliferative syndrome	Moderate, A		279.41	TNFRSF6; defective Fas-CD95 apoptosis. Synonym: Canale-Smith syndrome.
Autoimmune neutropenia	Moderate, F, N		288.09
Autoimmune thrombocytopenic purpura^[4]	Moderate, M, R, A		287.31	Autoantibodies: Anti gpIIb-IIIa or 1b-IX. Synonym: Idiopathic Thrombocytopenic Purpura (ITP)
Cold agglutinin disease	Moderate, M, A	II	283.0	Idiopathic or secondary to leukemia or infection. Autoantibodies: IgM. Synonym: Autoimmune hemolytic anemia.
Essential mixed cryoglobulinemia	Limited, C, Y		273.2
Evans syndrome	Moderate, Y		287.32	Syndrome with a combination of hemolytic anemia and thrombocytopenic purpura
Paroxysmal nocturnal hemoglobinuria	Limited, F, S		283.2
Pernicious anemia^[35]	Moderate, A	II	281.0	Autoantibodies: Anti-parietal cell antibody.
Pure red cell aplasia	Limited, Y		284.81
Thrombocytopenia^[36]^[37]	Limited, F, Y	II	287.5	Multiple mechanisms. Autoantibodies: Glycoproteins IIb-IIIa or Ib-IX in ITP anti-ADAMTS13 in TTP. and HUS anti-cardiolipin (anti-cardiolipin antibodies) and β2 glycoprotein I in Antiphospholipid syndrome; anti-HPA-1a, anti-HPA-5b, and others in NAIT. Synonyms: Neonatal thrombocytopenia
Connective Tissue, Systemic, and Multi-Organ
Adiposis dolorosa^[38]	Limited, L, S		272.8	Lipoid tissue. Synonym: Dercum's disease
Adult-onset Still's disease^[39]	Moderate, Y		714.2	Macrophage migration inhibitory factor. Autoantibodies: ANA.
Ankylosing Spondylitis^[15]^[16]	Limited, S		720.0	CD8; HLA-B27.
CREST syndrome	Limited, Y		710.1	Autoantibodies: Anti-centromere antibodies Anti-nuclear antibodies.
Drug-induced lupus	Moderate, Y		710.0	Autoantibodies: Anti-histone antibodies.
Enthesitis-related arthritis^[40]^[41]^[42]^[43]	Limited, C, Y			MMP3, TRLR2, TLR4, ERAP1. A subtype of Juvenile Rheumatoid Arthritis.
Eosinophilic fasciitis	Limited, F, A		728.89	Synonym: Shulman's syndrome
Felty syndrome^[44]	Strong, M, Y		714.1
IgG4-related disease	Limited, C, N			Characteristic histological features (storiform fibrosis, lymphoplasmacytic infiltrate, obliterative phlebitis) are required for definitive diagnosis. Synonyms: IgG4-related systemic disease, IgG4-related sclerosing disease, IgG4-related systemic sclerosing disease, IgG4-related autoimmune disease, IgG4-associated multifocal systemic fibrosis, IgG4-associated disease, IgG4 syndrome, Hyper-IgG4 disease, Systemic IgG4-related plasmacytic syndrome.
Juvenile Arthritis^[39]	Strong, M, R, Y		714.30	Autoantibodies: inconsistent ANA, Rheumatoid factor. Synonyms: Juvenile rheumatoid arthritis, Juvenile idiopathic arthritis
Lyme disease (Chronic)^[45]	Limited, L, T, N		088.81
Mixed connective tissue disease (MCTD)^[4]	Moderate, M, A		710.8	HLA-DR4. Autoantibodies: Anti-nuclear antibody, anti-U1-RNP.
Palindromic rheumatism^[46]	Limited, Y		719.3	Autoantibodies: Anti-cyclic citrullinated peptide antibodies (anti-CCP) and antikeratin antibodies (AKA). Synonym: Hench-Rosenberg syndrome.
Parry Romberg syndrome	Limited, Y		349.89 351.8	Autoantibodies: ANA.
Parsonage-Turner syndrome	Limited, Y		353.5
Psoriatic arthritis^[47]	Moderate, C, A	IV?	696.0	HLA-B27.
Reactive arthritis	Limited, C, F, Y		099.3	Synonym: Reiter's syndrome
Relapsing polychondritis^[48]	Strong, A		733.99	Synonyms: Atrophic polychondritis, systemic chondromalacia, chronic atrophic polychondritis, Meyenburg-Altherr-Uehlinger syndrome, generalized chondromalacia, systemic chondromalacia
Retroperitoneal fibrosis	Limited, Y		593.4
Rheumatic fever^[49]^[50]	Moderate, T, A	II	390	Autoantibodies: Streptococcal M protein cross reacts with human myosin.
Rheumatoid arthritis^[4]	Strong, M, A	III	714	HLA-DR4, PTPN22, depleted B cells, TNF alpha, IL-17, (also maybe IL-1, 6, and 15). Autoantibodies: Rheumatoid factor (anti-IgGFc), Anti-MCV, ACPAs(Vimentin).
Sarcoidosis^[51]^[52]^[53]	Limited, S	IV	135	BTNL2; HLA-B7-DR15; HLA DR3-DQ2.
Schnitzler syndrome	Limited, L, X, Y		273.1	IgM.
Systemic Lupus Erythematosus (SLE)^[4]^[10]^[11]^[12]^[20]^[54]	Strong, M, A	III	695.4	Autoantibodies: Anti-nuclear antibodies, anti-Ro (often present also in Sjogren's syndrome). Eosinophilia. Synonym: Lupus
Undifferentiated connective tissue disease (UCTD)	Moderate, C, A		710.9	HLA-DR4. Autoantibodies: anti-nuclear antibody. Synonyms: Latent lupus, incomplete lupus
Muscle
Dermatomyositis^[55]^[56]	Moderate, F, X, A		710.3	B- and T-cell perivascular inflammatory infiltrate on muscle biopsy. Autoantibodies: histidine-tRNA anti-signal recognition peptide Anti-Mi-2 Anti-Jo1. Synonym: Juvenile dermatomyositis
Fibromyalgia	Limited, C, F, N		729.1
Inclusion body myositis	Limited, F, Y		359.71	Similar to polymyositis, but does not respond to steroid therapy-activated T8 cells.
Myositis	Limited, F, Y		729.1
Myasthenia gravis^[4]	Strong, M, A	II	358	HA-B8 HLA-DR3 HLA-DR1. Autoantibodies: Nicotinic acetylcholine receptor MuSK protein.
Neuromyotonia^[57]	Limited, F, S	II?	333.90	Autoantibodies: Voltage-gated potassium channels. Synonym: Isaacs' syndrome
Paraneoplastic cerebellar degeneration^[58]^[59]^[60]	Limited, Y	IV? II?	334.9	Autoantibodies: anti-Yo (anti-cdr-2 in purkinje fibers) anti-Hu, anti-Tr, antiglutamate receptor.
Polymyositis^[55]	Limited, F, A		710.4	Autoantibodies: IFN-gamma, IL-1, TNF-alpha.
Nervous System
Acute disseminated encephalomyelitis (ADEM)	Strong, M, T, A		323.61 323.81	Synonyms: Perivenous encephalomyelitis, Acute hemorrhagic leukoencephalitis (AHL, AHLE), Acute necrotizing encephalopathy (ANE), Acute hemorrhagic encephalomyelitis (AHEM), Acute necrotizing hemorrhagic leukoencephalitis (ANHLE), Weston-Hurst syndrome, Hurst's disease.
Acute motor axonal neuropathy^[61]	Limited, N		356.8
Anti-N-Methyl-D-Aspartate (Anti-NMDA) Receptor Encephalitis^[62]	Moderate, N
Balo concentric sclerosis	Moderate, Y		341.1	Synonyms: Balo disease, Schilders disease.
Bickerstaff's encephalitis	Limited, Y		323.62	Similar to Guillain–Barré syndrome. Autoantibodies: Anti-GQ1b 2/3 patients.
Chronic inflammatory demyelinating polyneuropathy^[63]	Moderate, C, Y		357.81	Similar to Guillain–Barré syndrome. Autoantibodies: Anti-ganglioside antibodies. Synonyms: Relapsing polyneuropathy (CRP), chronic inflammatory demyelinating polyradiculoneuropathy, Chronic inflammatory demyelinating polyneuritis.
Guillain–Barré syndrome^[4]	Strong, M, A	IV	357.0	Autoantibodies: Anti-ganglioside, anti-GQ1b. Synonyms: Miller-Fisher syndrome, Landry's paralysis.
Hashimoto's encephalopathy^[4]^[64]	Moderate, C, X, A	IV		Autoantibodies: Alpha-enolase. Synonyms: Steroid-responsive encephalopathy associated with autoimmune thyroiditis (SREAT), Nonvasculitic autoimmune meningoencephalitis (NAIM), Encephalopathy Associated with Autoimmune Thyroid Disease (EAATD).
Idiopathic inflammatory demyelinating diseases	Limited, F, Y		356.8	A set of different variants of multiple sclerosis.
Lambert-Eaton myasthenic syndrome	Strong, M, Y		358.1	HLA-DR3-B8. Autoantibodies: Voltage-gated calcium channels; Q-type calcium channel, synaptogagmin, muscarinic acetylcholine receptor M1.
Multiple sclerosis, pattern II^[65]^[65]^[66]	Strong, M, A	IV	340	Autoantibody against potassium channel has been reported to present demyelination pattern II. Other cases present autoimmunity against MOG^[67] and Anoctamin-2.^[68] The three reported autoimmune variants belong to MS pattern II. Also involved HLA-DR2, PECAM-1, Anti-myelin basic protein. Autoantibodies: Anti-Kir4.1, Anti-MOG, Anti-ANO2 (heterogeneous). Synonyms: Primary progressive multiple sclerosis, Relapsing-remitting multiple sclerosis, disseminated sclerosis, encephalomyelitis disseminata.
Oshtoran Syndrome^[69]	X		F06.9	Heritable, abnormalities in the kynurenine and glutamate metabolism.
Pediatric Autoimmune Neuropsychiatric Disorder Associated with Streptococcus (PANDAS)	Limited, F, S	II?	279.49	Antibodies against streptococcal infection serve as auto-antibodies.
Progressive inflammatory neuropathy	Limited, X, S		356.4	Similar to Guillain–Barré syndrome. Autoantibodies: Anti-ganglioside antibodies:anti-GM1, anti-GD1a, anti-GQ1b.
Restless leg syndrome	Limited, C, S		333.94	May occur in Sjogren's syndrome, coeliac disease and rheumatoid arthritis, or in derangements of iron metabolism.
Stiff person syndrome^[70]	Limited, S		333.91	GLRA1 (glycine receptor). Autoantibodies: Glutamic acid decarboxylase (GAD).
Sydenham chorea	Limited, T, Y		392
Transverse myelitis	Limited, M, A		323.82 341.2
Eyes
Autoimmune retinopathy^[71]	Limited, X, N
Autoimmune uveitis	Moderate, F, A		364	Autoantibodies: HLAB-27.
Cogan syndrome	Limited, F, Y		370.52
Graves ophthalmopathy	Moderate, M, N		242.9
Intermediate uveitis	Limited, L, Y		364.3	Synonyms: Pars planitis, Peripheral Uveitis.
Ligneous conjunctivitis	Limited, L, N		372.39
Mooren's ulcer	Limited, L, N		370.07
Neuromyelitis optica^[72]^[73]	Limited, M, Y	II?	341.0	Autoantibodies: NMO-IgG aquaporin 4. Synonym: Devic's disease.
Opsoclonus myoclonus syndrome^[74]	Limited, X, S	IV?	379.59	Lymphocyte recruitment to CSF.
Optic neuritis	Limited, C, Y		377.30
Scleritis	Limited, C, Y		379.0
Susac's syndrome	Limited, C, Y		348.39	Synonym: Retinocochleocerebral Vasculopathy.
Sympathetic ophthalmia	Limited, I, Y		360.11	Autoantibodies: ocular antigens following trauma.
Tolosa-Hunt syndrome	Limited, I, X, Y		378.55
Ears
Autoimmune inner ear disease (AIED)^[75]	Limited, A		388.8
Ménière's disease^[76]	Limited, Y	III?	386.00	Autoantibodies: Major peripheral myelin protein P0.
Vascular System
Behçet's disease	Limited, I, X, A		136.1	An immune-mediated systemic vasculitis; linkage to HLA-B51 (HLA-B27); very variable manifestations, with ulcers as common symptom. Synonyms: Morbus Adamandiades-Behçet. Rare Variant: Hughes-Stovin syndrome.
Eosinophilic granulomatosis with polyangiitis (EGPA)^[20]^[77]	Limited, I, X, Y		446.4	Autoantibodies: p-ANCA Eosinophilia. Synonym: Churg-Strauss syndrome.
Giant cell arteritis^[4]	Limited, I, R, A	IV	446.5	Synonyms: Cranial arteritis, Temporal Arteritis.
Granulomatosis with polyangiitis (GPA)^[77]^[78]	Strong, M, A		446.4	Autoantibodies: Anti-neutrophil cytoplasmic (cANCA). Synonym: Wegener's granulomatosis.
IgA vasculitis (IgAV)^[77]	Limited, L, Y		287.0	Autoantibodies: IgA and complement component 3 (C3). Synonyms: Anaphylactoid purpura, Henoch-Schonlein purpura, purpura rheumatica, Schönlein–Henoch purpura.
Kawasaki's disease	Moderate, S,E^[79]		446.1	ITPKC HLA-B51. Synonyms: Kawasaki syndrome, lymph node syndrome, mucocutaneous lymph node syndrome.
Leukocytoclastic vasculitis	Limited, L, Y		447.6
Lupus vasculitis	Moderate, C, N		583.81	A comorbidity of Systemic Lupus Erythematosus.
Rheumatoid vasculitis	Moderate, C, N		447.6	A symptom of Lupus.
Microscopic polyangiitis (MPA)	Limited, Y		446.0	Binds to neutrophils causing them to degranulate and damages endothelium. Autoantibodies: p-ANCA myeloperoxidase. Synonyms: Microscopic polyarteritis, microscopic polyarteritis nodosa.
Polyarteritis nodosa (PAN)	Limited, L, Y		446.0	Synonyms: Panarteritis nodosa, periarteritis nodosa, Kussmaul disease, Kussmaul-Maier disease.
Polymyalgia rheumatica	Limited, L, Y		725
Urticarial vasculitis^[80]	Limited, X, Y	II?	708.9	Clinically may resemble type I hypersensitivity. Autoantibodies: anti C1q antibodies.
Vasculitis^[19]	Strong, I, M, F, A	III	447.6	Autoantibodies: ANCA (sometimes).
Systemic
Primary Immune Deficiency	Limited, N

Autoimmune Comorbidities

This list includes conditions that are not diseases but signs common to autoimmune disease. Some, such as Chronic Fatigue Syndrome, are controversial.^[2] These conditions are included here because they are frequently listed as autoimmune diseases but should not be included in the list above until there is more consistent evidence.

Organ/Tissue Type Disease Name	Level of Acceptance for Autoimmunity	ICD-9 Codes	Notes/Autoantibodies/Synonyms
Chronic fatigue syndrome	Comorbidity, N		Symptomatic of autoimmune diseases or autoimmune activity, but not a disease or a cause of disease.
Complex regional pain syndrome	Comorbidity, N		Symptomatic of autoimmune diseases or autoimmune activity, but not a disease or a cause of disease. Synonyms: Amplified Musculoskeletal Pain Syndrome, Reflex Neurovascular Dystrophy, Reflex sympathetic dystrophy
Eosinophilic esophagitis	Comorbidity, N	530.13
Gastritis	Comorbidity, Y		Possibly symptomatic of autoimmune diseases, but not a disease or a cause of disease. Autoantibodies: serum antiparietal and anti-IF antibodies.
Interstitial lung disease	Comorbidity, N		Associated with several autoimmune connective tissue diseases.
POEMS syndrome^[81]	Comorbidity, Y		Possibly symptomatic of autoimmune diseases, but not a disease or a cause of disease. Autoantibodies: interleukin 1β, interleukin 6 and TNFα. vascular endothelial growth factor (VEGF), given the ..
Raynaud's phenomenon	Comorbidity, S		Symptomatic of autoimmune diseases or autoimmune activity, but not a disease or a cause of disease.
Primary immunodeficiency^[82]	Comorbidity, N	279.8	The condition is inherited, but it is associated with several autoimmune diseases.
Pyoderma gangrenosum	Comorbidity, Y		Possibly symptomatic of autoimmune diseases, but not a disease or a cause of disease.

Non-Autoimmune

At this time, there is not sufficient evidence - direct, indirect, or circumstantial - to indicate that these diseases are caused by autoimmunity. These conditions are included here because:

The disease was listed in the prior version of this table
The disease is included in several widely used lists of autoimmune disease and is shown here to ensure that a person visiting this page does not conclude that the disease was not considered. Before moving a condition from here to the list of autoimmune diseases, references should be provided in the Wikipedia page for the condition that point to evidence, direct or indirect, that it is an autoimmune disease.

Organ/Tissue Type Disease Name	Level of Acceptance for Autoimmunity	Hypersensitivity (I,II,III,IV)	ICD-9 Codes	Notes/Autoantibodies/Synonyms
Agammaglobulinemia	Not Autoimmune, Y		279.00	An immune system disorder but not an autoimmune disease.. Autoantibodies: IGHM; IGLL1: CD79A; CD79B; BLNK; LRRC8A.
Amyloidosis	Not Autoimmune, N		277.30	No consistent evidence of association with autoimmunity.
Amyotrophic lateral sclerosis	Not Autoimmune, Y		335.20	No consistent evidence of association with autoimmunity. Autoantibodies: Amyotrophic lateral sclerosis (Also Lou Gehrig's disease; Motor Neuron Disease).
Anti-tubular basement membrane nephritis	Not Autoimmune, N			No consistent evidence of association with autoimmunity.
Atopic allergy	Not Autoimmune, Y	I	691.8	A hypersensitivity.
Atopic dermatitis	Not Autoimmune, Y	I	691.8	A hypersensitivity.
Autoimmune peripheral neuropathy	Not Autoimmune, F, A			A class of diseases, some of which may be autoimmune. See specific diseases that are listed as autoimmune..
Blau syndrome	Not Autoimmune, Y			Overlaps both sarcoidosis and granuloma annulare. No evidence of association with autoimmunity.
Cancer	Not Autoimmune, Y			No consistent evidence of association with autoimmunity.
Castleman's disease	Not Autoimmune, Y			An immune system disorder but not an autoimmune disease.. Autoantibodies: Over expression of IL-6.
Chagas disease^[83]	Not Autoimmune, S			No consistent evidence of association with autoimmunity.
Chronic obstructive pulmonary disease^[84]^[85]	Not Autoimmune, S			No consistent evidence of association with autoimmunity.
Chronic recurrent multifocal osteomyelitis	Not Autoimmune, Y			LPIN2, D18S60. Synonyms: Majeed syndrome
Complement component 2 deficiency	Not Autoimmune, Y			Possibly symptomatic of autoimmune diseases, but not a disease.
Congenital heart block	Not Autoimmune, N			May be related to autoimmune activity in the mother.
Contact dermatitis	Not Autoimmune, Y	IV		A hypersensitivity.
Cushing's syndrome	Not Autoimmune, Y			No consistent evidence of association with autoimmunity.
Cutaneous leukocytoclastic angiitis	Not Autoimmune, Y			No consistent evidence of association with autoimmunity. Autoantibodies: neutrophils.
Dego's disease	Not Autoimmune, Y			No consistent evidence of association with autoimmunity.
Eczema^[86]^[87]^[88]	Not Autoimmune, Y			No consistent evidence of association with autoimmunity. Autoantibodies: LEKTI, SPINK5, filaggrin., Brain-derived neurotrophic factor (BDNF) and Substance P..
Eosinophilic gastroenteritis	Not Autoimmune, Y			Possibly a hypersensitivity. Autoantibodies: IgE, IL-3, IL-5, GM-CSF, eotaxin.
Eosinophilic pneumonia	Not Autoimmune, F, Y			A class of diseases, some of which may be autoimmune. Specifically, Churg-Strauss syndrome, a subtype of Eosinophilic pneumonia, is autoimmune.
Erythroblastosis fetalis	Not Autoimmune, Y	II		Mother's immune system attacks fetus. An immune system disorder but not autoimmune. Autoantibodies: ABO, Rh, Kell antibodies.
Fibrodysplasia ossificans progressiva	Not Autoimmune, Y			Possibly an immune system disorder but not autoimmune. Autoantibodies: ACVR1 Lymphocytes express increased BMP4.
Gastrointestinal pemphigoid	Not Autoimmune, A			No consistent evidence of association with autoimmunity.
Hypogammaglobulinemia	Not Autoimmune, Y			An immune system disorder but not autoimmune. Autoantibodies: IGHM, IGLL1, CD79A, BLNK, LRRC8A, CD79B.
Idiopathic giant-cell myocarditis^[89]	Not Autoimmune, N			No consistent evidence of autoimmune cause though the disease has been found comorbid with other autoimmune diseases. Synonyms: Giant cell myocarditis
Idiopathic pulmonary fibrosis^[90]^[90]	Not Autoimmune, Y			Autoantibodies: SFTPA1, SFTPA2, TERT, and TERC.. Synonyms: Fibrosing alveolitis
IgA nephropathy	Not Autoimmune, Y	III?		Autoantibodies: IgA produced from marrow rather than MALT. Synonyms: IgA nephrits, Berger's disease, Synpharyngitic Glomerulonephritis. An immune system disorder but not an autoimmune disease.
Immunoregulatory lipoproteins^[91]	Not Autoimmune, N			Not a disease.
IPEX syndrome	Not Autoimmune, N			A genetic mutation in FOXP3 that leads to autoimmune diseases, but no consistent evidence that it is an autoimmune disorder itself.. Synonyms: X-linked polyendocrinopathy, immunodeficiency and diarrhea-syndrome (XLAAD)
Ligneous conjunctivitis	Not Autoimmune, N			No consistent evidence of association with autoimmunity.
Majeed syndrome	Not Autoimmune, Y			No consistent evidence of association with autoimmunity. Autoantibodies: LPIN2.
Narcolepsy^[92]^[93]^[94]^[95]	Not Autoimmune, Y	II?		No evidence of association with autoimmunity. Research not reproducible. Autoantibodies: hypocretin or orexin, HLA-DQB1*0602.
Rasmussen's encephalitis	Not Autoimmune, Y			No consistent evidence of association with autoimmunity. Autoantibodies: anti-NR2A antibodies.
Schizophrenia^[96]^[97]^[98]	Not Autoimmune, S			No consistent evidence of association with autoimmunity.
Serum sickness	Not Autoimmune, Y	III		A hypersensitivity.
Spondyloarthropathy	Not Autoimmune, Y			No consistent evidence of association with autoimmunity. Autoantibodies: HLA-B27.
Sweet's syndrome	Not Autoimmune, Y			No consistent evidence of association with autoimmunity. Autoantibodies: GCSF.
Takayasu's arteritis	Not Autoimmune, Y			No consistent evidence of association with autoimmunity.
Undifferentiated spondyloarthropathy	Not Autoimmune, Y			See Enthesitis-related arthritis.

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