Coelacanth

Coelacanths Temporal range: Early Devonian-Holocene,[1] 409–0 Ma PreЄ Є O S D C P T J K Pg N
A preserved specimen of West Indian Ocean coelacanth caught on 18 October 1974 off Salimani, Grand Comoro, Comoro Islands (length: 170 cm, weight: 60 kg)
Scientific classification
Kingdom:	Animalia
Phylum:	Chordata
Class:	Sarcopterygii
Subclass:	Actinistia
Order:	Coelacanthiformes L. S. Berg, 1937
Families and unplaced genera
†Styloichthys †Whiteiidae †Rebellatricidae †Coelacanthidae Suborder Latimerioidei †Mawsoniidae Latimeriidae

The coelacanths (/ˈsiːləkænθ/ SEE-lə-kanth) constitute a now rare order of fish that includes two extant species in the genus Latimeria: the West Indian Ocean coelacanth (Latimeria chalumnae) primarily found near the Comoro Islands off the east coast of Africa and the Indonesian coelacanth (Latimeria menadoensis).^[2] They follow the oldest known living lineage of Sarcopterygii (lobe-finned fish and tetrapods), which means they are more closely related to lungfish, reptiles, and mammals than to the common ray-finned fishes. They are found along the coastlines of the Indian Ocean and Indonesia.^[3][4] Since there are only two species of coelacanth and both are threatened, it is the most endangered order of animals in the world. The West Indian Ocean coelacanth is a critically endangered species.

Coelacanths belong to the subclass Actinistia, a group of lobed-finned fish related to lungfish and certain extinct Devonian fish such as osteolepiforms, porolepiforms, rhizodonts, and Panderichthys.^[5] Coelacanths were thought to have become extinct in the Late Cretaceous, around 66 million years ago, but were rediscovered in 1938 off the coast of South Africa.^[6][7]

The coelacanth was long considered a "living fossil" because it was believed to be the sole remaining member of a taxon otherwise known only from fossils, with no close relations alive,^[5] and to have evolved into roughly its current form approximately 400 million years ago.^[1] However, several recent studies have shown that coelacanth body shapes are much more diverse than previously thought.^[8][9][10]

Etymology

The word Coelacanth is an adaptation of the Modern Latin Cœlacanthus ("hollow spine"), from the Greek κοῖλ-ος (koilos "hollow" + ἄκανθ-α akantha "spine"). It is a common name for the oldest living line of Sarcopterygii,^[11] referring to the hollow caudal fin rays of the first fossil specimen described and named by Louis Agassiz in 1839.^[5] The genus name Latimeria commemorates Marjorie Courtenay-Latimer who discovered the first specimen in a fish market.^[12]

Discovery

The coelacanth, which is related to lungfishes and tetrapods, was believed to have been extinct since the end of the Cretaceous period.^[13] More closely related to tetrapods than to the ray-finned fish, coelacanths were considered transitional species between fish and tetrapods. On 23 December 1938, the first Latimeria specimen was found off the east coast of South Africa, off the Chalumna River (now Tyolomnqa).^[6][14] Museum curator Marjorie Courtenay-Latimer discovered the fish among the catch of a local angler, Captain Hendrick Goosen.^[6][14] A Rhodes University ichthyologist, J. L. B. Smith, confirmed the fish's importance with a famous cable: "MOST IMPORTANT PRESERVE SKELETON AND GILLS = FISH DESCRIBED."^[6][14]

Its discovery 66 million years after it was believed to have gone extinct makes the coelacanth the best-known example of a Lazarus taxon, an evolutionary line that seems to have disappeared from the fossil record only to reappear much later. Since 1938, West Indian Ocean coelacanth have been found in the Comoros, Kenya, Tanzania, Mozambique, Madagascar, and in iSimangaliso Wetland Park, Kwazulu-Natal in South Africa.^[15]

The Comoro Islands specimen was discovered in December 1952.^[16] Between 1938 and 1975, 84 specimens were caught and recorded.^[17]

The second extant species, Indonesian coelacanth, was described from Manado, North Sulawesi, Indonesia in 1999 by Pouyaud et al.^[18] based on a specimen discovered by Mark V. Erdmann in 1998^[19] and deposited at the Indonesian Institute of Sciences (LIPI). Only a photograph of the first specimen of this species was made at a local market by Erdmann and his wife Arnaz Mehta before it was bought by a shopper.

The coelacanth has no real commercial value apart from being coveted by museums and private collectors. As a food fish it is almost worthless, as its tissues exude oils that give the flesh a foul flavor.^[20] The coelacanth's continued survival may be threatened by commercial deep-sea trawling,^[21] in which coelacanths are caught as bycatch.

Physical description

Reconstruction of West Indian Ocean coelacanth

Preserved Latimeria menadoensis, Tokyo Sea Life Park (Kasai Rinkai Suizokuen), Japan

Coelacanths are a part of the clade Sarcopterygii, or the lobe-finned fishes. Externally, several characteristics distinguish the coelacanth from other lobe-finned fish. They possess a three-lobed caudal fin, also called a trilobate fin or a diphycercal tail. A secondary tail extending past the primary tail separates the upper and lower halves of the coelacanth. Cosmoid scales act as thick armor to protect the coelacanth's exterior. Several internal traits also aid in differentiating coelacanths from other lobe-finned fish. At the back of the skull, the coelacanth possesses a hinge, the intracranial joint, which allows it to open its mouth extremely wide. Coelacanths also retain an oil-filled notochord, a hollow, pressurized tube which is replaced by the vertebral column early in embryonic development in most other vertebrates.^[22] The coelacanth heart is shaped differently from that of most modern fish, with its chambers arranged in a straight tube. The coelacanth braincase is 98.5% filled with fat; only 1.5% of the braincase contains brain tissue. The cheeks of the coelacanths are unique because the opercular bone is very small and holds a large soft-tissue opercular flap. A spiracular chamber is present, but the spiracle is closed and never opens during development.^[23] Coelacanth also possess a unique rostral organ within the ethmoid region of the braincase.^[5][24] Also unique to extant coelacanths is the presence of a "fatty lung" or a fat-filled single-lobed vestigial lung, homologous to other fishes' swim bladder. The parallel development of a fatty organ for buoyancy control suggest a unique specialization for deep-water habitats. There has also been discovered small, hard but flexible plates around the vestigial lung in adult specimen, though not around the fatty organ. The plates most likely had a regulation function for the volume of the lung.^[25] Due to the size of the fatty organ, it is assumed to be responsible for the kidney's unusual relocation. The two kidneys, which are fused into one,^[26] are located ventrally within the abdominal cavity, posterior to the cloaca.^[27]

General description

West Indian Ocean coelacanth caught on 21 January 1965, near Mutsamudu (Anjouan, Comoro Islands)

Pectoral fin of a West Indian Ocean coelacanth

Latimeria chalumnae and L. menadoensis are the only two known living coelacanth species.^[5][28] The word "coelacanth" is derived from the Greek for “hollow spine”, because of the fish's unique hollow spine fins.^[24] Coelacanths are large, plump, lobe-finned fish that can grow to more than 2 meters (6.5 feet) and weigh around 90 kilograms (200 pounds). They are estimated to live for 60 years or more.^[29] Coelacanths are considered to be larger today than those found as fossils.^[30]

They are nocturnal piscivorous drift-hunters.^[31] The body is covered in cosmoid scales that act as armor.^[32] Coelacanths have eight fins – 2 dorsal fins, 2 pectoral fins, 2 pelvic fins, 1 anal fin and 1 caudal fin. The tail is very nearly equally proportioned and is split by a terminal tuft of fin rays that make up its caudal lobe. The eyes of the coelacanth are very large, while the mouth is very small. The eye is acclimatized to seeing in poor light by rods that absorb mostly short wavelengths. Coelacanth vision has evolved to a mainly blue-shifted color capacity.^[33] Pseudomaxillary folds surround the mouth and replace the maxilla, a structure absent in coelacanths. Two nostrils, along with four other external openings, appear between the premaxilla and lateral rostral bones. The nasal sacs resemble those of many other fish and do not contain an internal nostril. The coelacanth's rostral organ, contained within the ethmoid region of the braincase, has three unguarded openings into the environment and is used as a part of the coelacanth's laterosensory system.^[5] The coelacanth's auditory reception is mediated by its inner ear, which is very similar to that of tetrapods because it is classified as being a basilar papilla.^[34]

Coelacanth locomotion is unique. To move around they most commonly take advantage of up- or down-wellings of current and drift. Their paired fins stabilize movement through the water. While on the ocean floor, they do not use the paired fins for any kind of movement. Coelacanths create thrust with their caudal fins for quick starts. Due to the abundance of its fins, the coelacanth has high maneuverability and can orient its body in almost any direction in the water. They have been seen doing headstands as well as swimming belly up. It is thought that the rostral organ helps give the coelacanth electroperception, which aids in movement around obstacles.^[31]

DNA

In 2013, a group led by Chris Amemiya and Neil Shubin published the genome sequence of the coelacanth in the journal Nature. The African coelacanth genome was sequenced and assembled using DNA from a Comoros Islands Latimeria chalumnae specimen. It was sequenced by Illumina sequencing technology and assembled using the short read genome assembler ALLPATHS-LG.^[35]

Due to their lobed fins and other features, it was once thought that the coelacanth was the most recent shared ancestor between terrestrial and marine organisms. But after sequencing the full genome of the coelacanth, it was discovered that the lungfish species is the most recent shared ancestor. Coelacanths and lungfish had already diverged from a common ancestor before the lungfish made the transition to land.^[36]

The vertebrate land transition is one of the most important steps in our evolutionary history. We conclude that the closest living fish to the tetrapod ancestor is the lungfish, not the coelacanth. However, the coelacanth is critical to our understanding of this transition, as the lungfish have intractable genome sizes (estimated at 50–100Gb).^[35]

Another important discovery made from the genome sequencing, is that the coelacanths are still evolving today (but at a relatively slow rate). This contradicts the earlier thought that these creatures were "living fossils." What this means is that they were thought to be a prehistoric species that has remained unchanged over millions of years. With the discovery of their evolution, "living fossil" no longer seems like an appropriate term to describe these unique creatures.^[36]

Reasons for such slow evolution by coelacanths could be the lack of evolutionary pressure on these organisms. They have few predators, and they live deep in the Indian Ocean where conditions are said to be very stable. Without much pressure for these organisms to adapt to survive, the rate at which they need to evolve is much slower in comparison to other organisms.^[36]

Taxonomy

In Late Devonian vertebrate speciation, descendants of pelagic lobe-finned fish – like Eusthenopteron – exhibited a sequence of adaptations: Panderichthys, suited to muddy shallows; Tiktaalik with limb-like fins that could take it up onto land; and Early tetrapods in weed-filled swamps, such as Acanthostega which had feet with eight digits and Ichthyostega with limbs. Descendants also included pelagic lobe-finned fish such as coelacanth species

The following is a classification of known coelacanth genera and families:^{[5][10][28][37][38][39][40]}

• Order Coelacanthiformes
  • Family Whiteiidae (Triassic)
    • Piveteauia
    • Whiteia
  • Family Rebellatricidae (Triassic)
    • Rebellatrix
  • Family Coelacanthidae (Permian to Jurassic)
    • Axelia
    • Coelacanthus
    • Ticinepomis
    • Wimania
  • Suborder Latimerioidei
    • Family Mawsoniidae (Triassic to Jurassic)
      • Alcoveria
      • Axelrodichthys
      • Chinlea
      • Diplurus
      • Garnbergia
      • Mawsonia
      • Parnaibaia
    • Family Latimeriidae L. S. Berg, 1940 (Triassic to Holocene)
      • Holophagus
      • Latimeria J. L. B. Smith, 1939
        • Latimeria chalumnae J. L. B. Smith, 1939 (West Indian Ocean coelacanth)
        • Latimeria menadoensis Pouyaud, Wirjoatmodjo, Rachmatika, Tjakrawidjaja, Hadiaty & Hadie, 1999 (Indonesian coelacanth)
      • Libys
      • Macropoma
      • Macropomoides
      • Megacoelacanthus
      • Swenzia
      • Undina

Fossil record

Undina penicillata

According to genetic analysis of current species, the divergence of coelacanths, lungfish and tetrapods is thought to have occurred about 390 million years ago.^[1] Coelacanths were thought to have undergone extinction 66 million years ago during the Cretaceous–Paleogene extinction event; but since several Cenozoic taxa have been recovered.^[41] The first recorded coelacanth fossil, found in Australia, was of a jaw that dated back 360 million years, named Eoachtinistia foreyi. The most recent genus of coelacanth in the fossil record is the Macropomoides, a genus relatively closely related to Latimeria, which occurred across the Miocene. The fossil record is unique because coelacanth fossils were found 100 years before the first live specimen was identified. In 1938, Courtenay-Latimer rediscovered the first live specimen, L. chalumnae, caught off the coast of East London, South Africa. In 1997, a marine biologist on honeymoon discovered the second live species, Latimeria menadoensis, in an Indonesian market.

In July 1998, the first live specimen of Latimeria menadoensis was caught in Indonesia. Approximately 80 species of coelacanth have been described, including the two extant species. Before the discovery of a live specimen, the coelacanth time range was thought to have spanned from the Middle Devonian to the Upper Cretaceous period. Although fossils found during that time were claimed to demonstrate a similar morphology,^[4][5] recent studies have expressed the view that coelacanth morphologic conservatism is a belief not based on data.^{[8][9][10][42]}

The following cladogram is based on multiple sources.^{[10][38][39][40]}

Timeline of genera

Geographic distribution

Geographical distribution of coelacanth.

The current coelacanth range is primarily along the eastern African coast, although Latimeria menadoensis was discovered off Indonesia. Coelacanths have been found in the waters of Kenya, Tanzania, Mozambique, South Africa, Madagascar, Comoros and Indonesia.^[4] Most Latimeria chalumnae specimens that have been caught have been captured around the islands of Grande Comore and Anjouan in the Comoros Archipelago (Indian Ocean). Though there are cases of L. chalumnae caught elsewhere, amino acid sequencing has shown no big difference between these exceptions and those found around Comore and Anjouan. Even though these few may be considered strays, there are several reports of coelacanths being caught off of the coast of Madagascar. This leads scientists to believe that the endemic range of Latimeria chalumnae coelacanths stretches along the eastern coast of Africa from the Comoros Islands, past the western coast of Madagascar to the South African coastline.^[5] Mitochondrial DNA sequencing of coelacanths caught off the coast of southern Tanzania suggests a divergence of the two populations some 200,000 years ago. This could refute the theory that the Comoros population is the main population while others represent recent offshoots.^[43]

The geographical range of the Indonesia coelacanth, Latimeria menadoensis, is believed to be off the coast of Manado Tua Island, Sulawesi, Indonesia in the Celebes Sea.^[3] Key components confining coelacanths to these areas are food and temperature restrictions, as well as ecological requirements such as caves and crevices that are well-suited for drift feeding.^[44]

Ecology

Anjouan Island and the Grande Comore provide ideal underwater cave habitats for coelacanths. The islands' underwater volcanic slopes, steeply eroded and covered in sand, house a system of caves and crevices which allow coelacanths resting places during the daylight hours. These islands support a large benthic fish population that help to sustain coelacanth populations.^[44][45]

During the daytime, coelacanths will rest in caves anywhere from 100 to 500 meters deep; others migrate to deeper waters.^[4][5] The cooler waters (below 120 meters) reduce the coelacanths' metabolic costs. Drifting toward reefs and night feeding saves vital energy.^[44] Resting in caves during the day also saves energy otherwise used to fight currents.^[45]

Latimeria chalumnae model in the Oxford University Museum of Natural History, showing the coloration in life.

Coelacanths are nocturnal piscivores who feed mainly on benthic fish populations and various cephalopods. They are "passive drift feeders", allowing themselves to be slowly transported by currents with only minimal self-propulsion, eating whatever prey is encountered in this way.^[44][45]

Coelacanths are fairly peaceful when encountering others of their kind; remaining calm even in a crowded cave. They do avoid body contact, however, withdrawing immediately if contact occurs. When approached by foreign potential predators (e.g. a submersible), they show panic flight reactions, suggesting that coelacanths are most likely prey to large deepwater predators. Shark bite marks have been seen on coelacanths; sharks are common in areas inhabited by coelacanths.^[45] Electrophoresis testing of 14 coelacanth enzymes shows little genetic diversity between coelacanth populations. Among the fish that have been caught were about equal numbers of males and females.^[5] Population estimates range from 210 individuals per population all the way to 500 per population.^[5][46] Because coelacanths have individual color markings, scientists think that they recognize other coelacanths via electric communication.^[45]

Life history

Fossil of Axelrodichthys araripensis, an extinct coelacanthiform

Latimeria chalumnae embryo with its yolk sac from the Muséum national d'histoire naturelle

Coelacanths are ovoviviparous, meaning that the female retains the fertilized eggs within her body while the embryos develop during a gestation period of over a year. Typically, females are larger than the males; their scales and the skin folds around the cloaca differ. The male coelacanth has no distinct copulatory organs, just a cloaca, which has a urogenital papilla surrounded by erectile caruncles. It is hypothesized that the cloaca everts to serve as copulatory organ.^[5][7]

Coelacanth eggs are large with only a thin layer of membrane to protect them. Embryos hatch within the female and eventually are given live birth, which is a rarity in fish. This was only discovered when the American Museum of Natural History had dissected its first coelacanth specimen in 1975 and found it to be pregnant with five embryos.^[47] Young coelacanths resemble the adult, the main differences being an external yolk sac, larger eyes relative to body size and a more pronounced downward slope of the body. The juvenile coelacanth's broad yolk sac hangs below the pelvic fins. The scales and fins of the juvenile are completely matured; however, it does lack odontodes, which it gains during maturation.^[7]

A study that assessed the paternity of the embryos inside two Coelacanth females indicated that each clutch was sired by a single male.^[48] This could mean that females mate monandrously, i.e. with one male only. Polyandry, female mating with multiple males, is common in both plants and animals and can be advantageous (e.g. insurance against mating with an infertile or incompatible mate), but also confers costs (increased risk of infection, danger of falling prey to predators, increased energy input when searching for new males). Alternatively, the study's results could indicate that, despite female polyandry, one male's is used to fertilise all the eggs, potentially through female sperm choice or last-male sperm precedence.

Conservation

Coelacanth

Because little is known about the coelacanth, the conservation status is difficult to characterize. According to Fricke et al. (1995), there should be some stress put on the importance of conserving this species. From 1988 to 1994, Fricke counted some 60 individuals of L. chalumnae on each dive. In 1995 that number dropped to 40. Even though this could be a result of natural population fluctuation, it also could be a result of overfishing. The IUCN currently classifies L. chalumnae as Critically Endangered,^[49] with a total population size of 500 or fewer individuals.^[5] L. menadoensis is considered to be Vulnerable, with a significantly larger population size (< 10,000 individuals).^[50]

Currently, the major threat towards the coelacanth is the accidental capture by fishing operations.^[51] Coelacanths usually are caught when local fishermen are fishing for oilfish. Fishermen sometimes snag a coelacanth instead of an oilfish because they traditionally fish at night, when oilfish (and coelacanths) feed. Before scientists became interested in coelacanths, they were thrown back into the water if caught. Now that there is an interest in them, fishermen trade them in to scientists or other officials once they have been caught. Before the 1980s, this was a problem for coelacanth populations. In the 1980s, international aid gave fiberglass boats to the local fishermen, which resulted in fishing beyond the coelacanth territories into more fish-productive waters. Since then, most of the motors on the boats have broken down so the local fishermen are now back in the coelacanth territory, putting the species at risk again.^[5][52]

Different methods to minimize the number of coelacanths caught include moving fishers away from the shore, using different laxatives and malarial salves to reduce the quantity of oilfish needed, using coelacanth models to simulate live specimens, and increasing awareness of the need to protect the species. In 1987 the Coelacanth Conservation Council advocated the conservation of coelacanths. The CCC has many branches of its agency located in Comoros, South Africa, Canada, the United Kingdom, the U.S.A, Japan and Germany. The agencies were established to help protect and encourage population growth of coelacanths.^[5][53]

A "Deep Release Kit" was developed and distributed by private initiative, consisting of a weighted hook assembly that allows a fisherman to return an accidentally caught coelacanth to deep waters where the hook can be detached once it hits the sea floor. Conclusive reports about the effectiveness of this method are still pending.^[54]

In 2002, the South African Coelacanth Conservation and Genome Resource Programme was launched to help further the studies and conservation of the coelacanth. This program focuses on biodiversity conservation, evolutionary biology, capacity building, and public understanding. The South African government committed to spending R10 million on the program.^[55][56] In 2011, a plan for a Tanga Coelacanth Marine Park was designed the conserve marine biodiversity for marine animals including the coelacanth. The park was designed to reduce habitat destruction and improve prey availability for endangered species.^[57]

Human consumption

Coelacanths are considered a poor source of food for humans and likely most other fish-eating animals. Coelacanth flesh has high amounts of oil, urea, wax esters, and other compounds that are difficult to digest and can cause diarrhea. Their scales themselves emit mucus, which combined with the excessive oil their bodies produce, make coelacanths a slimy food.^[58] Where the coelacanth is more common, local fishermen avoid it because of its potential to sicken consumers.^[59]

References

Further reading

• Smith, J. L. B. (1956). Old Fourlegs: the Story of the Coelacanth. Longmans Green. 
• Fricke, Hans (June 1988). "Coelacanths — The Fish That Time Forgot". National Geographic. Vol. 173 no. 6. pp. 824–838. ISSN 0027-9358. OCLC 643483454. 
• Wade, Nicholas (18 April 2013). "Fish’s DNA May Explain How Fins Turned to Feet". The New York Times. pp. A3. 
• Thomson, Keith S. (1991). Living Fossil: the Story of the Coelacanth. W. W. Norton. 
• Sepkoski, Jack (2002). "A compendium of fossil marine animal genera". Bulletins of American Paleontology. 364: 560. Archived from the original on 20 February 2009. Retrieved 2011-05-17. 
• Weinberg, Samantha (1999). A Fish Caught In Time: The Search for the Coelacanth. Fourth Estate. 
• Bruton, Mike (2015). When I Was a Fish: Tales of an Ichthyologist. Jacana Media(Pty)Ltd. 

External links

Wikimedia Commons has media related to Coelacanthiformes.

Wikispecies has information related to: Latimeria

• Anatomy of the coelacanth by PBS (Adobe Flash required)
• Dinofish.com (requires a frame-capable browser)
• Butler, Carolyn (August 2012). "Der Quastenflosser: Ein Fossil taucht auf" [The Coelacanth: A fossil turns up]. National Geographic Deutschland (in German). 
• Amemiya, Chris T.; Alföldi, Jessica; Lee, Alison P.; Fan, Shaohua; Philippe, Hervé; MacCallum, Iain; Braasch, Ingo; Manousaki, Tereza; Schneider, Igor; et al. (2013). "The African coelacanth genome provides insights into tetrapod evolution". Nature. 496 (7445): 311–6. Bibcode:2013Natur.496..311A. PMC 3633110 . PMID 23598338. doi:10.1038/nature12027. 
• 'Living fossil' coelacanth genome sequenced BBC News Science & Environment; 17 April 2013

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