RRP9

Ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)

Available structures

Ortholog search: PDBe, RCSB

List of PDB id codes
4J0W, 4JXM

Identifiers

RRP9 ; RNU3IP2; U3-55K

External IDs

MGI: 2384313 HomoloGene: 3452 GeneCards: RRP9 Gene

Gene ontology
Molecular function	• poly(A) RNA binding
Cellular component	• nucleus • nucleolus • small nucleolar ribonucleoprotein complex • small nuclear ribonucleoprotein complex
Biological process	• rRNA processing
Sources: Amigo / QuickGO

RNA expression pattern

More reference expression data

Orthologs

Species

Human

Mouse

ENSG00000114767

ENSMUSG00000041506

RefSeq (mRNA)

RefSeq (protein)

Location (UCSC)

Chr 3:
51.97 – 51.98 Mb

Chr 9:
106.48 – 106.49 Mb

PubMed search

U3 small nucleolar RNA-interacting protein 2 is a protein that in humans is encoded by the RRP9 gene.^[1]^[2]^[3]

See also

References

↑ Pluk H, Soffner J, Luhrmann R, van Venrooij WJ (Jan 1998). "cDNA Cloning and Characterization of the Human U3 Small Nucleolar Ribonucleoprotein Complex-Associated 55-Kilodalton Protein". Mol Cell Biol 18 (1): 488–98. PMC 121518. PMID 9418896.
↑ Verheggen C, Lafontaine DL, Samarsky D, Mouaikel J, Blanchard JM, Bordonne R, Bertrand E (May 2002). "Mammalian and yeast U3 snoRNPs are matured in specific and related nuclear compartments". EMBO J 21 (11): 2736–45. doi:10.1093/emboj/21.11.2736. PMC 126019. PMID 12032086.
↑ "Entrez Gene: RRP9 RRP9, small subunit (SSU) processome component, homolog (yeast)".

Further reading

Lukowiak AA; Granneman S; Mattox SA et al. (2000). "Interaction of the U3-55k protein with U3 snoRNA is mediated by the Box B/C motif of U3 and the WD repeats of U3-55k". Nucleic Acids Res. 28 (18): 3462–71. doi:10.1093/nar/28.18.3462. PMC 110750. PMID 10982864.
Andersen JS; Lyon CE; Fox AH et al. (2002). "Directed proteomic analysis of the human nucleolus". Curr. Biol. 12 (1): 1–11. doi:10.1016/S0960-9822(01)00650-9. PMID 11790298.
Granneman S; Pruijn GJ; Horstman W et al. (2003). "The hU3-55K protein requires 15.5K binding to the box B/C motif as well as flanking RNA elements for its association with the U3 small nucleolar RNA in Vitro". J. Biol. Chem. 277 (50): 48490–500. doi:10.1074/jbc.M206631200. PMID 12381732.
Scherl A; Couté Y; Déon C et al. (2003). "Functional Proteomic Analysis of Human Nucleolus". Mol. Biol. Cell 13 (11): 4100–9. doi:10.1091/mbc.E02-05-0271. PMC 133617. PMID 12429849.
Strausberg RL; Feingold EA; Grouse LH et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Gerhard DS; Wagner L; Feingold EA et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Watkins NJ; Lemm I; Ingelfinger D et al. (2005). "Assembly and maturation of the U3 snoRNP in the nucleoplasm in a large dynamic multiprotein complex". Mol. Cell 16 (5): 789–98. doi:10.1016/j.molcel.2004.11.012. PMID 15574333.
Andersen JS; Lam YW; Leung AK et al. (2005). "Nucleolar proteome dynamics". Nature 433 (7021): 77–83. doi:10.1038/nature03207. PMID 15635413.
Barrios-Rodiles M; Brown KR; Ozdamar B et al. (2005). "High-throughput mapping of a dynamic signaling network in mammalian cells". Science 307 (5715): 1621–5. doi:10.1126/science.1105776. PMID 15761153.
Olsen JV; Blagoev B; Gnad F et al. (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983.