RDBP

Negative elongation factor complex member E

PDB rendering based on 1x5p.
Available structures
PDB Ortholog search: PDBe, RCSB
Identifiers
SymbolsNELFE ; D6S45; NELF-E; RD; RDBP; RDP
External IDsOMIM: 154040 MGI: 102744 HomoloGene: 134736 GeneCards: NELFE Gene
RNA expression pattern
More reference expression data
Orthologs
SpeciesHumanMouse
Entrez793627632
EnsemblENSG00000204356ENSMUSG00000024369
UniProtP18615P19426
RefSeq (mRNA)NM_002904NM_001045863
RefSeq (protein)NP_002895NP_001039328
Location (UCSC)Chr 6:
31.92 – 31.93 Mb
Chr 17:
34.85 – 34.86 Mb
PubMed search

Negative elongation factor E is a protein that in humans is encoded by the RDBP gene.[1]

The protein encoded by this gene is part of a complex termed negative elongation factor (NELF) which represses RNA polymerase II transcript elongation. This protein bears similarity to nuclear RNA-binding proteins; however, it has not been demonstrated that this protein binds RNA. The protein contains a tract of alternating basic and acidic residues, largely arginine (R) and aspartic acid (D). The gene localizes to the major histocompatibility complex (MHC) class III region on chromosome 6.[1]

Interactions

RDBP has been shown to interact with TH1L,[2][3] WHSC2[3] and Cofactor of BRCA1.[3][4]

References

  1. 1.0 1.1 "Entrez Gene: RDBP RD RNA binding protein".
  2. Ewing, Rob M; Chu Peter, Elisma Fred, Li Hongyan, Taylor Paul, Climie Shane, McBroom-Cerajewski Linda, Robinson Mark D, O'Connor Liam, Li Michael, Taylor Rod, Dharsee Moyez, Ho Yuen, Heilbut Adrian, Moore Lynda, Zhang Shudong, Ornatsky Olga, Bukhman Yury V, Ethier Martin, Sheng Yinglun, Vasilescu Julian, Abu-Farha Mohamed, Lambert Jean-Philippe, Duewel Henry S, Stewart Ian I, Kuehl Bonnie, Hogue Kelly, Colwill Karen, Gladwish Katharine, Muskat Brenda, Kinach Robert, Adams Sally-Lin, Moran Michael F, Morin Gregg B, Topaloglou Thodoros, Figeys Daniel (2007). "Large-scale mapping of human protein-protein interactions by mass spectrometry". Mol. Syst. Biol. (England) 3 (1): 89. doi:10.1038/msb4100134. PMC 1847948. PMID 17353931.
  3. 3.0 3.1 3.2 Narita, Takashi; Yamaguchi Yuki, Yano Keiichi, Sugimoto Seiji, Chanarat Sittinan, Wada Tadashi, Kim Dong-ki, Hasegawa Jun, Omori Masashi, Inukai Naoto, Endoh Masaki, Yamada Tomoko, Handa Hiroshi (Mar 2003). "Human transcription elongation factor NELF: identification of novel subunits and reconstitution of the functionally active complex". Mol. Cell. Biol. (United States) 23 (6): 1863–73. doi:10.1128/MCB.23.6.1863-1873.2003. ISSN 0270-7306. PMC 149481. PMID 12612062.
  4. Lehner, Ben; Semple Jennifer I; Brown Stephanie E; Counsell Damian; Campbell R Duncan; Sanderson Christopher M (Jan 2004). "Analysis of a high-throughput yeast two-hybrid system and its use to predict the function of intracellular proteins encoded within the human MHC class III region". Genomics (United States) 83 (1): 153–67. doi:10.1016/S0888-7543(03)00235-0. ISSN 0888-7543. PMID 14667819.

Further reading

External links