PEG10
| Paternally expressed 10 | |||||||||||||
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| Identifiers | |||||||||||||
| Symbols | PEG10 ; EDR; HB-1; MEF3L; Mar2; Mart2; RGAG3 | ||||||||||||
| External IDs | OMIM: 609810 MGI: 2157785 HomoloGene: 116067 GeneCards: PEG10 Gene | ||||||||||||
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| RNA expression pattern | |||||||||||||
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| More reference expression data | |||||||||||||
| Orthologs | |||||||||||||
| Species | Human | Mouse | |||||||||||
| Entrez | 23089 | 170676 | |||||||||||
| Ensembl | ENSG00000242265 | ENSMUSG00000092035 | |||||||||||
| UniProt | Q86TG7 | Q7TN75 | |||||||||||
| RefSeq (mRNA) | NM_001040152 | NM_001040611 | |||||||||||
| RefSeq (protein) | NP_001035242 | NP_001035701 | |||||||||||
| Location (UCSC) | Chr 7: 94.29 – 94.3 Mb | Chr 6: 4.75 – 4.76 Mb | |||||||||||
| PubMed search | |||||||||||||
Retrotransposon-derived protein PEG10 is a protein that in humans is encoded by the PEG10 gene.[1][2][3][4]
Function
This gene includes two overlapping reading frames of the same transcript encoding distinct isoforms. The shorter isoform has a CCHC-type zinc finger motif containing a sequence characteristic of gag proteins of most retroviruses and some retrotransposons, and it functions in part by interacting with members of the TGF-beta receptor family. The longer isoform has the active-site DSG consensus sequence of the protease domain of pol proteins. The longer isoform is the result of -1 translational frameshifting that is also seen in some retroviruses. Expression of these two isoforms only comes from the paternal allele due to imprinting. Increased gene expression (as observed by an increase in mRNA levels) is associated with hepatocellular carcinomas.[4]
PEG10 is a paternally expressed imprinted gene that is expressed in adult and embryonic tissues.[5] Most notable expression occurs in the placenta. This gene is highly conserved across mammalian species and retains the heptanucleotide (GGGAAAC). This gene has been reported to play a role in cell proliferation, differentiation and apoptosis. Overexpression of this gene has been associated with several malignancies, such as hepatocellular carcinoma and B-cell lymphocytic leukemia. Knockout mice lacking this gene showed early embryonic lethality with placental defects, indicating the importance of this gene in embryonic development. In preeclampsia placental tissue, PEG10 has been shown to be downregulated[6] and upregulated[7] implicating it as a possible causal role in the occurance of preeclampsia.
Interactions
PEG10 has been shown to interact with SIAH2[8] and SIAH1.[8]
References
- ↑ Ono R, Kobayashi S, Wagatsuma H, Aisaka K, Kohda T, Kaneko-Ishino T et al. (Apr 2001). "A retrotransposon-derived gene, PEG10, is a novel imprinted gene located on human chromosome 7q21". Genomics 73 (2): 232–7. doi:10.1006/geno.2001.6494. PMID 11318613.
- ↑ Brandt J, Schrauth S, Veith AM, Froschauer A, Haneke T, Schultheis C et al. (Jan 2005). "Transposable elements as a source of genetic innovation: expression and evolution of a family of retrotransposon-derived neogenes in mammals". Gene 345 (1): 101–11. doi:10.1016/j.gene.2004.11.022. PMID 15716091.
- ↑ Brandt J, Veith AM, Volff JN (Aug 2005). "A family of neofunctionalized Ty3/gypsy retrotransposon genes in mammalian genomes". Cytogenetic and Genome Research 110 (1-4): 307–17. doi:10.1159/000084963. PMID 16093683.
- ↑ 4.0 4.1 "Entrez Gene: PEG10 paternally expressed 10".
- ↑ "PEG10 paternally expressed 10 [ Homo sapiens (human) ]". Pubmed. Retrieved 14 April 2015.
- ↑ Liang XY, Chen X, Jin YZ, Chen XO, Chen QZ (Dec 18, 2014). "Expression and significance of the imprinted gene PEG10 in placenta of patients with preeclampsia". Genetics and Molecular Research 13 (4). doi:10.4238/2014.December.18.2. PMID 25526181.
- ↑ Chen H, Sun M, Zhao G, Liu J, Gao W, Si S et al. (Oct 2012). "Elevated expression of PEG10 in human placentas from preeclamptic pregnancies". Acta Histochemica 114 (6). doi:10.1016/j.acthis.2011.11.003. PMID 22137777.
- ↑ 8.0 8.1 Okabe H, Satoh S, Furukawa Y, Kato T, Hasegawa S, Nakajima Y et al. (Jun 2003). "Involvement of PEG10 in human hepatocellular carcinogenesis through interaction with SIAH1". Cancer Research 63 (12): 3043–8. PMID 12810624.
Further reading
- Andersson B, Wentland MA, Ricafrente JY, Liu W, Gibbs RA (Apr 1996). "A "double adaptor" method for improved shotgun library construction". Analytical Biochemistry 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474.
- Yu W, Andersson B, Worley KC, Muzny DM, Ding Y, Liu W et al. (Apr 1997). "Large-scale concatenation cDNA sequencing". Genome Research 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC 139146. PMID 9110174.
- Kikuno R, Nagase T, Ishikawa K, Hirosawa M, Miyajima N, Tanaka A et al. (Jun 1999). "Prediction of the coding sequences of unidentified human genes. XIV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Research 6 (3): 197–205. doi:10.1093/dnares/6.3.197. PMID 10470851.
- Volff J, Körting C, Schartl M (Feb 2001). "Ty3/Gypsy retrotransposon fossils in mammalian genomes: did they evolve into new cellular functions?". Molecular Biology and Evolution 18 (2): 266–70. doi:10.1093/oxfordjournals.molbev.a003801. PMID 11158386. Vancouver style error (help)
- Shigemoto K, Brennan J, Walls E, Watson CJ, Stott D, Rigby PW et al. (Oct 2001). "Identification and characterisation of a developmentally regulated mammalian gene that utilises -1 programmed ribosomal frameshifting". Nucleic Acids Research 29 (19): 4079–88. doi:10.1093/nar/29.19.4079. PMC 60235. PMID 11574691.
- Smallwood A, Papageorghiou A, Nicolaides K, Alley MK, Jim A, Nargund G et al. (Jul 2003). "Temporal regulation of the expression of syncytin (HERV-W), maternally imprinted PEG10, and SGCE in human placenta". Biology of Reproduction 69 (1): 286–93. doi:10.1095/biolreprod.102.013078. PMID 12620933.
- Okabe H, Satoh S, Furukawa Y, Kato T, Hasegawa S, Nakajima Y et al. (Jun 2003). "Involvement of PEG10 in human hepatocellular carcinogenesis through interaction with SIAH1". Cancer Research 63 (12): 3043–8. PMID 12810624.
- Tsou AP, Chuang YC, Su JY, Yang CW, Liao YL, Liu WK et al. (2004). "Overexpression of a novel imprinted gene, PEG10, in human hepatocellular carcinoma and in regenerating mouse livers". Journal of Biomedical Science 10 (6 Pt 1): 625–35. doi:10.1159/000073528. PMID 14576465.
- Suzuki Y, Yamashita R, Shirota M, Sakakibara Y, Chiba J, Mizushima-Sugano J et al. (Sep 2004). "Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions". Genome Research 14 (9): 1711–8. doi:10.1101/gr.2435604. PMC 515316. PMID 15342556.
- Lux A, Beil C, Majety M, Barron S, Gallione CJ, Kuhn HM et al. (Mar 2005). "Human retroviral gag- and gag-pol-like proteins interact with the transforming growth factor-beta receptor activin receptor-like kinase 1". The Journal of Biological Chemistry 280 (9): 8482–93. doi:10.1074/jbc.M409197200. PMID 15611116.
- Manktelow E, Shigemoto K, Brierley I (2005). "Characterization of the frameshift signal of Edr, a mammalian example of programmed -1 ribosomal frameshifting". Nucleic Acids Research 33 (5): 1553–63. doi:10.1093/nar/gki299. PMC 1065257. PMID 15767280.
- He H, Olesnanik K, Nagy R, Liyanarachchi S, Prasad ML, Stratakis CA et al. (Jul 2005). "Allelic variation in gene expression in thyroid tissue". Thyroid 15 (7): 660–7. doi:10.1089/thy.2005.15.660. PMID 16053381.
- Hu C, Xiong J, Zhang L, Huang B, Zhang Q, Li Q et al. (Aug 2004). "PEG10 activation by co-stimulation of CXCR5 and CCR7 essentially contributes to resistance to apoptosis in CD19+CD34+ B cells from patients with B cell lineage acute and chronic lymphocytic leukemia". Cellular & Molecular Immunology 1 (4): 280–94. PMID 16225771.
- Kimura K, Wakamatsu A, Suzuki Y, Ota T, Nishikawa T, Yamashita R et al. (Jan 2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Research 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129. PMID 16344560.
- Li CM, Margolin AA, Salas M, Memeo L, Mansukhani M, Hibshoosh H et al. (Jan 2006). "PEG10 is a c-MYC target gene in cancer cells". Cancer Research 66 (2): 665–72. doi:10.1158/0008-5472.CAN-05-1553. PMID 16423995.