Negishi coupling

The Negishi coupling is a widely employed transition metal catalyzed cross-coupling reaction. The reaction couples organic halides or triflates with organozinc compounds, forming carbon-carbon bonds (c-c) in the process. A palladium (0) species is generally utilized as the metal catalyst, though nickel is sometimes used:[1][2]

Palladium catalysts in general have higher chemical yields and higher functional group tolerance.

The Negishi coupling finds common use in the field of total synthesis as a method for selectively forming c-c bonds between complex synthetic intermediates. The reaction allows for the coupling of sp3, sp2, and sp carbons, (see orbital hybridization) which make it somewhat unique among the Palladium-catalyzed coupling reactions. Organozincs are moisture and air sensitive, so the Negishi coupling must be performed in an oxygen and water free environment, a fact that has hindered its use relative to other cross-coupling reactions that require less robust conditions (i.e. Suzuki reaction). However, organozincs are more reactive than both organostannanes and organoborates which correlates to faster reaction times.

The reaction is named after Ei-ichi Negishi who was a co-recipient of the 2010 Nobel Prize in Chemistry for the discovery and development of this reaction.

History

El-ichi Negishi and coworkers originally investigated the cross-coupling of organoaluminum reagents in 1976 initially employing Ni and Pd as the transition metal catalysts, but noted that Ni resulted in the decay of stereospecifity whereas Pd did not.[3]Transitioning from organoaluminum species to organozinc compounds Negishi and coworkers reported the use of Pd complexes in organozinc coupling reactions and carried out methods studies, eventually developing the reaction conditions into those commonly utilized today.[4] Alongside Richard F. Heck and Akira Suzuki, El-ichi Negishi was a co-recipient of the Nobel Peace Prize in Chemistry in 2010, for his work on “palladium-catalyzed cross couplings in organic synthesis.”

Reaction mechanism

The reaction mechanism is thought to proceed via a standard Pd catalyzed cross-coupling pathway, starting with a Pd(0) species, which is oxidized to Pd(II) in an oxidative addition step involving the organohalide species.[5] This step proceeds with aryl, vinyl, alkynyl, and acyl halides, acetates, or triflates, with substrates following standard oxidative addition relative rates (I>OTf>Br>>Cl).[6]

The actual mechanism of oxidative addition is unresolved, though there are two likely pathways. One pathway is thought to proceed via an SN2 like mechanism resulting in inverted stereochemistry. The other pathway proceeds via concerted addition and retains stereochemistry.

Though the additions are cis- the Pd(II) complex rapidly isomerizes to the trans- complex.[7]

Next, the transmetalation step occurs where the organozinc reagent exchanges its organic substituent with the halide in the Pd(II) complex, generating the trans- Pd(II) complex and a zinc halide salt. The organozinc substrate can be aryl, vinyl, allyl, benzyl, homoallyl, or homopropargyl.[8] Transmetalation is usually rate limiting and a complete mechanistic understanding of this step has not yet been reached. ZnXR and ZnR2 can both be used as reactive reagents, and Zn is known to prefer four coordinate complexes, which means solvent coordinated Zn complexes, such as ZnXR(solvent) 2 cannot be ruled out a priori. [9] Studies indicate competing equilibriums exist between cis- and trans- bis alkyl organopalladium complexes, but that the only productive intermediate is the cis complex.[10] [11]

The last step in the catalytic pathway of the Negishi coupling is reductive elimination, which is thought to proceed via a three coordinate transition state, yielding the coupled organic product and regenerating the Pd(0) catalyst. For this step to occur, the aforementioned cis- alky organopalladium complex must be formed.[12]

Both organozinc halides and diorganozinc compounds can be used as starting materials. In one model system it was found that in the transmetalation step the former give the cis-adduct R-Pd-R' resulting in fast reductive elimination to product while the latter gives the trans-adduct which has to go through a slow trans-cis isomerization first.[10]

A common side reaction is homocoupling. In one Negishi model system the formation of homocoupling was found to be the result of a second transmetalation reaction between the diarylmetal intermediate and arylmetal halide:[13]

Ar–Pd–Ar' + Ar'–Zn–X → Ar'–Pd–Ar' + Ar–Zn–X
Ar'–Pd–Ar' → Ar'–Ar' + Pd(0) (homocoupling)
Ar–Zn–X + H2O → Ar–H + HO–Zn–X (reaction accompanied by dehalogenation)

Scope

The Negishi coupling has been applied in the synthesis of a 2,2'-bipyridine from 2-bromopyridine with tetrakis(triphenylphosphine)palladium(0),[14] the synthesis of a biphenyl from o-tolylzinc chloride and o-iodotoluene and tetrakis(triphenylphosphine)palladium(0),[15] the synthesis of 5,7-hexadecadiene from 1-decyne and (Z)-1-hexenyl iodide.[16]

Structure of hexaferrocenylbenzene, C6[(η5-C5H4)Fe(η5-C5H5)]6

Negishi coupling has been applied in the synthesis of hexaferrocenylbenzene:[17]

with hexaiodidobenzene, diferrocenylzinc and tris(dibenzylideneacetone)dipalladium(0) in tetrahydrofuran. The yield is only 4% signifying substantial crowding around the aryl core.

In a novel modification palladium is first oxidized by the haloketone 2-chloro-2-phenylacetophenone 1 and the resulting palladium OPdCl complex then accepts both the organozinc compound 2 and the organotin compound 3 in a double transmetalation:[18]

Industrial Applications

The Negishi coupling is not employed as frequently in industrial applications as its cousins the Suzuki reaction and Heck reaction, mostly as a result of the water and air sensitivity of the required alkyl Zn reagents.[19] [20] In 2003 Novartis employed a Negishi coupling in the manufacture of PDE472, a phosphodiesterase type 4D inhibitor, which was being investigated as a drug lead for the treatment of asthma.[21] The Negishi coupling was used as an alternative to the Suzuki reaction providing improved yields, 73% on a 4.5 kg scale, of the desired benzodioxazole synthetic intermediate.[22]

Applications in Total Synthesis

Where the Negishi coupling is rarely used in industrial chemistry, a result of the aforementioned water and oxygen sensitivity, it finds wide use in the field of natural products total synthesis. The increased reactivity relative to other cross-coupling reactions makes the Negishi coupling ideal for joining complex intermediates in the synthesis of natural products.[23] Additionally, Zn is more environmentally friendly than other metals such as Sn used in the Stille coupling. Though the Negishi coupling historically has not been used as much as the Stille or Suzuki coupling, recent years have seen the Negishi coupling gain a foothold in the field of synthetic chemistry, so much so that it has become the cross-coupling method of choice for select synthetic tasks. When it comes to fragment-coupling processes the Negishi coupling is particularly useful, especially when compared to the aforementioned Stille and Suzuki coupling reactions.[24] The major drawback of the Negishi coupling, aside from its water and oxygen sensitivity, is its relative lack of functional group tolerance when compared to other cross-coupling reactions.[25]

(−)-stemoamide is a natural product found in the root extracts of ‘’Stemona tuberosa’’. These extracts have been used Japanese and Chinese folk medicine to treat respiratory disorders, and (−)-stemoamide is also an anthelminthic. Somfai and coworkers employed a Negishi coupling in their synthesis of (−)-stemoamide. [26] The reaction was implemented mid-synthesis, forming an sp3-sp2 c-c bond between β,γ-unsaturated ester and an intermediate diene 4 with a 78% yield of product 5. Somfai completed the stereoselective total synthesis of (−)-stemoamide in 12-steps with a 20% overall yield.

Kibayashi and coworkers utilized the Negishi coupling in the total synthesis of Pumiliotoxin B. Pumiliotoxin B is one of the major toxic alkaloids isolated from Dendrobates pumilio, a Panamanian poison frog. These toxic alkaloids display modulatory effects on voltage-dependent sodium channels, resulting in cardiotonic and myotonic activity.[27] Kibayashi employed the Negishi coupling late stage in the synthesis of Pumiliotoxin B, coupling a homoallylic sp3 carbon on the zinc alkylidene indolizidine 6 with the (E)-vinyl iodide 7 with a 51% yield. The natural product was then obtained after deprotection.[28]

δ-trans-tocotrienoloic acid isolated from the plant, Chrysochlamys ulei, is a natural product shown to inhibit DNA polymerase β (pol β), which functions to repair DNA via base excision. Inhibition of pol B in conjunction with other chemotherapy drugs may increase the cytotoxicity of these chemotherapeutics, leading to lower effective dosages. The Negishi coupling was implemented in the synthesis of δ-trans-tocotrienoloic acid by Hecht and Maloney coupling the sp3 homopropargyl zinc reagent 8 with sp2 vinyl iodide 9.[29] The reaction proceeded with quantitative yield, coupling fragments mid-synthesis in route to the stereoselectively synthesized natural product δ-trans-tocotrienoloic acid.

Preparation of Organozinc Precursors

Alkylzinc reagents can be accessed from the corresponding alkyl bromides using iodine in dimethylacetamide (DMAC).[30]The catalytic I2 serves to activate the zinc towards nucleophilic addition.

Aryl zincs can be synthesized using mild reaction conditions via a Grignard like intermediate. [31]

See also

External links

References

  1. ↑ Anthony O. King, Nobuhisa Okukado and Ei-ichi Negishi (1977). "Highly general stereo-, regio-, and chemo-selective synthesis of terminal and internal conjugated enynes by the Pd-catalysed reaction of alkynylzinc reagents with alkenyl halides". Journal of the Chemical Society Chemical Communications (19): 683. doi:10.1039/C39770000683.
  2. ↑ Strategic Applications of Named Reactions in Organic Synthesis Laszlo Kurti, Barbara Czako Academic Press (March 4, 2005) ISBN 0-12-429785-4
  3. ↑ Baba, S.; Negishi, E. (1976). "A novel stereospecific alkenyl-alkenyl cross-coupling by a palladium- or nickel-catalyzed reaction of alkenylalanes with alkenyl halides". Journal of the American Chemical Society 98 (21): 6729–6731. doi:10.1021/ja00437a067.
  4. ↑ Negishi, E.; King, A. O.; Okukado, N. (1977). "Selective carbon-carbon bond formation via transition metal catalysis. 3. A highly selective synthesis of unsymmetrical biaryls and diarylmethanes by the nickel- or palladium-catalyzed reaction of aryl- and benzylzinc derivatives with aryl halides". The Journal of Organic Chemistry 42 (10): 1821–1823. doi:10.1021/jo00430a041.
  5. ↑ Kurti, L.; Czako, B. (2005). Strategic Applications of Named Reactions in Organic Synthesis. New York: Elsevier Academic Press.
  6. ↑ Haidle, A. C., Chris; Hansen, Eric; Myers, Andrew,. Myers, A., ed. Suzuki Reaction. Chemistry 115 Handouts,. Harvard University: Boston, Massachusetts.
  7. ↑ Casado, A. L.; Espinet, P. (1998). "On the Configuration Resulting from Oxidative Addition of RX to Pd(PPh3)4 and the Mechanism of the cis-to-trans Isomerization of [PdRX(PPh3)2] Complexes (R = Aryl, X = Halide)". Organometallics 17 (5): 954–959. doi:10.1021/om9709502.
  8. ↑ Kurti, L.; Czako, B. (2005). Strategic Applications of Named Reactions in Organic Synthesis. New York: Elsevier Academic Press.
  9. ↑ García-Melchor, M.; Braga, A. A. C.; Lledós, A.; Ujaque, G.; Maseras, F. (2013). "Computational Perspective on Pd-Catalyzed C–C Cross-Coupling Reaction Mechanisms". Accounts of Chemical Research 46 (11): 2626–2634. doi:10.1021/ar400080r.
  10. ↑ 10.0 10.1 Casares, J. A.; Espinet, P.; Fuentes, B.; Salas, G. (2007). "Insights into the Mechanism of the Negishi Reaction:  ZnRX versus ZnR2 Reagents". Journal of the American Chemical Society 129 (12): 3508–3509. doi:10.1021/ja070235b. PMID 17328551.
  11. ↑ Fuentes, B.; García-Melchor, M.; Lledós, A.; Maseras, F.; Casares, J. A.; Ujaque, G.; Espinet, P. (2010). "Palladium Round Trip in the Negishi Coupling of trans-[PdMeCl(PMePh2)2] with ZnMeCl: An Experimental and DFT Study of the Transmetalation Step". Chemistry – A European Journal 16 (29): 8596–8599. doi:10.1002/chem.201001332.
  12. ↑ Crabtree, R. (2005). The Organometallic Chemistry of the Transition Metals 4. Hoboken, NJ: John Wiley and Sons Inc.
  13. ↑ Revealing a Second Transmetalation Step in the Negishi Coupling and Its Competition with Reductive Elimination: Improvement in the Interpretation of the Mechanism of Biaryl Syntheses Qiang Liu, Yu Lan, Jing Liu, Gang Li, Yun-Dong Wu and Aiwen Lei J. Am. Chem. Soc., Article ASAP doi:10.1021/ja903277d
  14. ↑ Adam P. Smith, Scott A. Savage, J. Christopher Love, and Cassandra L. Fraser (2004). "Synthesis of 4-, 5-, and 6-methyl-2,2'-bipyridine by a Negishi cross-coupling strategy: 5-methyl-2,2'-bipyridine". Org. Synth.; Coll. Vol. 10, p. 517
  15. ↑ Ei-ichi Negishi, Tamotsu Takahashi, and Anthony O. King (1993). "Synthesis of biaryls via palladium-catalyzed cross-coupling: 2-methyl-4'-nitrobiphenyl". Org. Synth.; Coll. Vol. 8, p. 430
  16. ↑ Ei-ichi Negishi, Tamotsu Takahashi, and Shigeru Baba (1993). "Palladium-catalyzed synthesis of conjugated dienes". Org. Synth.; Coll. Vol. 8, p. 295
  17. ↑ Yong Yu, Andrew D. Bond, Philip W. Leonard, Ulrich J. Lorenz, Tatiana V. Timofeeva, K. Peter C. Vollhardt, Glenn D. Whitener and Andrey A. Yakovenko (2006). "Hexaferrocenylbenzene". Chem. Commun. (24): 2572–2574. doi:10.1039/b604844g. PMID 16779481.
  18. ↑ Yingsheng Zhao, Haibo Wang, Xiaohui Hou, Yanhe Hu, Aiwen Lei, Heng Zhang, and Lizheng Zhu (2006). "Oxidative Cross-Coupling through Double Transmetallation: Surprisingly High Selectivity for Palladium-Catalyzed Cross-Coupling of Alkylzinc and Alkynylstannanes". J. Amer. Chem. Soc. 128 (47): 15048–9. doi:10.1021/ja0647351. PMID 17117830.
  19. ↑ Johansson Seechurn, C. C. C.; Kitching, M. O.; Colacot, T. J.; Snieckus, V. (2012). "Palladium-Catalyzed Cross-Coupling: A Historical Contextual Perspective to the 2010 Nobel Prize". Angewandte Chemie International Edition 51 (21): 5062–5085. doi:10.1002/anie.201107017.
  20. ↑ Sase, S.; Jaric, M.; Metzger, A.; Malakhov, V.; Knochel, P. (2008). "One-Pot Negishi Cross-Coupling Reactions of In Situ Generated Zinc Reagents with Aryl Chlorides, Bromides, and Triflates". The Journal of Organic Chemistry 73 (18): 7380–7382. doi:10.1021/jo801063c.
  21. ↑ Manley, P. W.; Acemoglu, M.; Marterer, W.; Pachinger, W. (2003). "Large-Scale Negishi Coupling as Applied to the Synthesis of PDE472, an Inhibitor of Phosphodiesterase Type 4D". Organic Process Research & Development 7 (3): 436–445. doi:10.1021/op025615q.
  22. ↑ Torborg, C.; Beller, M. (2009). "Recent Applications of Palladium-Catalyzed Coupling Reactions in the Pharmaceutical, Agrochemical, and Fine Chemical Industries". Advanced Synthesis & Catalysis 351 (18): 3027–3043. doi:10.1002/adsc.200900587.
  23. ↑ Kurti, L.; Czako, B. (2005). Strategic Applications of Named Reactions in Organic Synthesis. New York: Elsevier Academic Press.
  24. ↑ Nicolaou, K. C.; Bulger, P. G.; Sarlah, D. (2005). "Palladium-catalyzed cross-coupling reactions in total synthesis". Angew. Chem., Int. Ed. 44 (29): 4442–4489. doi:10.1002/anie.200500368.
  25. ↑ Lessene, G. (2004). "Advances in the Negishi coupling". Aust. J. Chem. 57 (1): 107. doi:10.1071/ch03225.
  26. ↑ Torssell, S.; Wanngren, E.; Somfai, P. (2007). "Total Synthesis of (−)-Stemoamide". The Journal of Organic Chemistry 72 (11): 4246–4249. doi:10.1021/jo070498o.
  27. ↑ Gusovsky, F.; Padgett, W. L.; Creveling, C. R.; Daly, J. W. (1992). "Interaction of pumiliotoxin B with an "alkaloid-binding domain" on the voltage-dependent sodium channel". Molecular Pharmacology 42 (6): 1104–1108.
  28. ↑ Aoyagi, S.; Hirashima, S.; Saito, K.; Kibayashi, C. (2002). "Convergent Approach to Pumiliotoxin Alkaloids. Asymmetric Total Synthesis of (+)-Pumiliotoxins A, B, and 225F". The Journal of Organic Chemistry 67 (16): 5517–5526. doi:10.1021/jo0200466.
  29. ↑ Maloney, D. J.; Hecht, S. M. (2005). "A Stereocontrolled Synthesis of δ-trans-Tocotrienoloic Acid". Organic Letters 7 (19): 4297–4300. doi:10.1021/ol051849t. PMID 16146411.
  30. ↑ Huo, S. (2003). "Highly Efficient, General Procedure for the Preparation of Alkylzinc Reagents from Unactivated Alkyl Bromides and Chlorides". Organic Letters 5 (4): 423–425. doi:10.1021/ol0272693.
  31. ↑ Giovannini, R.; Knochel, P. (1998). "Ni(II)-Catalyzed Cross-Coupling between Polyfunctional Arylzinc Derivatives and Primary Alkyl Iodides". Journal of the American Chemical Society 120 (43): 11186–11187. doi:10.1021/ja982520o.