List of sequenced fungi genomes
This list of sequenced fungi genomes contains all the fungal species known to have publicly available complete genome sequences that have been assembled, annotated and published; draft genomes are not included, nor are organelle only sequences.
- This list is incomplete; you can help by expanding it.
Ascomycota
Ascomycetes
- Neurospora crassa, model eukaryote (2003[1])
- Neurospora tetrasperma FGSC 2508 mat A, model (2010[2])
Dothideomycetes
- Aureobasidium pullulans, A. melanogenum, A. subglaciale and A. namibiae, polyextremotolerant (2014[3])
- Hortaea werneckii, extremely halotolerant (2013[4])
- Leptosphaeria maculans, plant pathogen (2011[5])
- Macrophomina phaseolina, plant pathogen (2012[6])
- Mycosphaerella fijiensis, plant pathogen (2007[7])
- Mycosphaerella graminicola IPO323, wheat pathogen (2008[8])
- Phaeosphaeria nodorum SN15, wheat pathogen (2005[9])
- Pyrenophora tritici-repentis Pt-1C-BFP, wheat pathogen (2007[10])
Eurotiomycetes
- Ajellomyces capsulata several strains, Darling's disease (2009, unpubl.[11])
- Ajellomyces dermatitidis several strains (2009, unpubl.[12])
- Arthroderma benhamiae CBS 112371, skin infection (2010, unpubl.[13])
- Arthroderma gypseum CBS 118893, athlete's foot (2008[14])
- Arthroderma otae CBS 113480, athlete's foot (2008[14])
- Aspergillus aculeatus ATCC16872, industrial use (2010[15])
- Aspergillus carbonarius ITEM 5010, food pathogen (2009[16])
- Aspergillus clavatus Strain:NRRL1 (2008[17])
- Aspergillus fumigatus Strain:A1163, human pathogen (2008[17])
- Aspergillus fumigatus Strain:Af293, human pathogen (2005[18])
- Aspergillus kawachii IFO 4308, food industry (2011[19])
- Aspergillus nidulans Strain:FGSC A4, model organism (2005[20])
- Aspergillus niger Strain:ATCC 1015 (DOE Joint Genome institute)
- Aspergillus niger Strain:CBS 513.88, industrial use (2007[21])
- Aspergillus oryzae Strain:RIB40, industrial use (2005[22])
- Aspergillus terreus NIH 2624, statin producer and pathogen (2005, unpubl.[23])
- Coccidioides immitis, human pathogen, Valley fever (2009[24])
- Coccidioides posadasii C735 delta SOWgp, human pathogen, Valley fever (2009[24])
- Neosartorya fischeri Strain:NRRL181 (2008[17])
- Paracoccidioides brasiliensis, several strains, human pathogen (2007[25]
- Penicillium chrysogenum Strain: Wisconsin54-1255, industrial use (2008[26])
- Penicillium digitatum Strain PHI26 (2012[27])
- Penicillium digitatum Strain Pd1 (2012[27]
- Penicillium marneffei, human pathogen (2011[28])
- Uncinocarpus reesii (2009[24])
Leotiomycetes
- Blumeria graminis ffsp hordei Strain:DH14, plant pathogen (2010)
- Botrytis cinerea (Botryotinia fuckeliana) Strain:B05.10 and T4, plant pathogen (2011[29])
- Glarea lozoyensis (2012[30])
- Sclerotinia sclerotiorum Strain:1980 (2011[29])
- Ascocoryne sarcoides Strain: NRRL50072 (2012[31])
Pezizomycetes
- Tuber melanosporum Mel28, Périgord black truffle (2010[32])
Saccharomycetes
- Ashbya gossypii Strain:ATCC 10895, plant pathogen (2004[33])
- Candida albicans Strain:WO-1, human pathogen (2009[34])
- Candida dubliniensis CD36, human pathogen (2009[35])
- Candida glabrata Strain:CBS138, human pathogen (2004[36])
- Candida guilliermondii, human pathogen (2009[34])
- Candida lusitaniae, human pathogen (2009[34])
- Candida parapsilosis, human pathogen (2009[34])
- Candida orthopsilosis'', human pathogen (2012[37])
- Candida tropicalis, human pathogen (2009[34])
- Debaryomyces hansenii Strain:CBS767, industrial use (2004[36])
- Debaryomyces hansenii Strain:MTCC 234, salt-tolerant (2012[38])
- Dekkera bruxellensis Strain:CBS2499, wine yeast (2012[39])
- Hansenula polymorpha NCYC 495 leu1.1, industrial use (2010[40])
- Kluyveromyces aestuarii ATCC 18862 (2010, unpubl.[41])
- Kluyveromyces lactis Strain:CLIB210, industrial use (2004[36])
- Kluyveromyces wickerhamii UCD 54-210 (2010, unpubl.[42])
- Lachancea kluyveri (Saccharomyces kluyveri) NRRL Y-12651, plant pathogen (2009[43])
- Lodderomyces elongisporus, human pathogen (2009[34])
- Naumovozyma castellii Strain:AS 2.2404, CBS 4309 (Saccharomyces castellii; 2003,[44] 2011[45])
- Naumovozyma dairenensis Strain:CBS 421 (2011[45])
- Saccharomyces bayanus (2003,[44][46] 2011[47])
- Saccharomyces arboricolus (2013,[48])
- Saccharomyces cerevisiae Strain:JAY291, industrial/model (2009[49])
- Saccharomyces cerevisiae Strain:S288C, industrial/model (1996[50])
- Saccharomyces cerevisiae Strain:Sigma1278b, industrial/model (2010[51])
- Saccharomyces kudriavzevii (2003[44][47])
- Saccharomyces mikatae (2003,[44][46] 2011[47])
- Saccharomyces paradoxus (2003[46] 2009[52])
- Saccharomyces pastorianus Weihenstephan 34/70, industrial, beer (2009[53])
- Scheffersomyces stipitis (Pichia stipitis) CBS 6054, lignin/xylose degrader (2007[54])
- Spathaspora passalidarum NRRL Y-27907, model xylose fermenter (2010[55])
- Tetrapisispora phaffii van der Walt Y 89, CBS 4417 (2011[45])
- Torulaspora delbrueckii Strain:Wallerstein 129, CBS 1146 (2011[45])
- Vanderwaltozyma polyspora DSM 70294 (2007[56])
- Yarrowia lipolytica Strain:CLIB99, industrial use (2004[36])
- Zygosaccharomyces rouxii strain CBS732, food spoiler (2009[57])
Schizosaccharomycetes
- Schizosaccharomyces japonicus yFS275, model for invasive growth (2006[58])
- Schizosaccharomyces pombe Strain:972h, model eukaryote (2002[59])
Sordariomycetes
- Colletotrichum graminicola, corn pathogen (2012[60])
- Colletotrichum higginsianum, Arabidopsis thaliana pathogen (2012[60])
- Chaetomium globosum Strain:CBS 148.51, soil fungus (2005[61])
- Fusarium oxysporum f. sp. lycopersici 4287, human/plant pathogen (2010[62])
- Gibberella moniliformis 7600, plant pathogen (2010[62])
- Gibberella zeae PH-1, plant pathogen (2008[63])
- Gaeumannomyces graminis tritici R3-111a-1 (2010, unpubl.[64])
- Grosmannia clavigera kw1407, plant pathogen (2011[65])
- Magnaporthe grisea, plant pathogen (20054[66])
- Metarhizium acridum CQMa 102, and
- Metarhizium anisopliae ARSEF 23, insect pathogens (2011[67])
- Nectria haematococca MPVI, plastic/pest./lignin degrader (2009[68])
- Podospora anserina :S mat+ (2008[28])
- Sporotrichum thermophile, thermophilic cellulose degrader (2010[69])
- Thielavia terrestris, model thermophile/industrial (2010[70])
- Trichoderma atroviride, industrial/soil, (2010[71])
- Trichoderma reesei QM6a, biomass-degrading (2008[72])
- Trichoderma virens Gv29-8, industrial/pathogen (2007[73])
- Verticillium albo-atrum VaMs.102, plant pathogen (2008, unpubl.[74])
Basidiomycota
Agaricomycetes
- Agaricus bisporus var. bisporus Strain:H97, Champignon (2009[75])
- Auricularia delicata (2012[76])
- Coniophora puteana (2012[76])
- Coprinopsis cinerea (Coprinus cinereus), model organism for multicellular fungi (2010[77])
- Dichomitus squalens (2012[76])
- Fibroporia radiculosa Strain:TFFH 294 (2012[78])
- Fomitiporia mediterranea (2012[76])
- Fomitopsis pinicola (2012[76])
- Gloeophyllum trabeum (2012[76])
- Heterobasidion annosum, plant pathogen (2009[79])
- Laccaria bicolor Strain:S238N-H82, mycorrhiza (2008[80])
- Moniliophthora perniciosa, Witches' Broom Disease of cacao (2008[81])
- Phanerochaete chrysosporium Strain:RP78, mycoremediation (2004[82])
- Piriformospora indica endophyte (2011[83])
- Pleurotus ostreatus, industrial/lignin degrader (2010[84])
- Postia placenta, cellulose degrader (2008[72][85])
- Punctularia strigosozonata (2012[76])
- Schizophyllum commune, mushroom (2010[86])
- Serpula lacrymans, plant pathogen (2011[87])
- Stereum hirsutum (2012[76])
- Trametes versicolor (2012[76])
- Wolfiporia cocos (2012[76])
Pucciniomycetes (formerly Urediniomycetes)
- Melampsora laricis-populina, pathogen of populars (2008[88])
- Puccinia graminis f. sp. tritici, plant pathogen (2011[89][90])
- Puccinia triticina 1-1 BBBD Race 1, pathogen of wheat([90])
- Rhodotorula graminis strain WP1, plant symbiont (2010[91])
- Sporobolomyces roseus, associated with plants ([92])
Tremellomycetes
- Cryptococcus (Filobasidiella) neoformans JEC21, human pathogen (2005,[93] other strains unpubl.[94])
- Dacryopinax sp. (2012[76])
- Tremella mesenterica (2012[76])
Ustilaginomycetes
- Malassezia globosa CBS 7966, dandruff-associated (2007[95])
- Malassezia restricta CBS 7877, dandruff-associated (2007[95])
- Sporisorium rellianum, plant pathogen (2010[96])
- Ustilago maydis, plant pathogen (2006[97])
Wallemiomycetes
- Wallemia ichthyophaga, obligate halophile (2013[98])
- Wallemia sebi, xerophile (2012[99])
Chytridiomycota
Chytridiomycota is probably a polyphyletic group[100][101] that includes fungi with spores that have flagella (zoospores) and are a sister group to more advanced land fungi that lack flagella. Several chytrid species are pathogens, but have not had their genomes sequenced yet.
- Batrachochytrium dendrobatidis JEL423, amphibian pathogen (2006[102])
- Batrachochytrium dendrobatidis JAM81, amphibian pathogen (2006[103])
- Spizellomyces punctatus DAOM BR117 (2009[104])
- Allomyces macrogynus ATCC 38327 (Blastocladiomycota) (2009[105])
- Gonapodya prolifera JEL478 (Monoblepharidomycetes) (2011[106])
- Piromyces sp. E2 (Neocallimastigomycota) (2011[107])
- Catenaria anguillulae PL171 (Blastocladiomycota)[108]
Microsporidia
- Encephalitozoon cuniculi, human pathogen (2001[109])
- Encephalitozoon intestinalis ATCC 50506, human pathogen (2010[110])
- Enterocytozoon bieneusi, human pathogen particularly in the context of HIV infection (~60% of genome 2009,[111] 2010[112])
- Nosema ceranae, honey bee pathogen (2009[113])
- Octosporea bayeri OER 3-3, Daphnia pathogen (2009[114])
Zygomycota
Zygomycota is probably a polyphyletic group[115] that contains basal fungal lineages.
- Rhizopus oryzae, human pathogen (mucormycosis) (2009[116])
- Mortierella alpina Strain: ATCC 32222, commercial source of arachidonic acid (2011[117])
See also
- List of sequenced animal genomes
- List of sequenced archaeal genomes
- List of sequenced bacterial genomes
- List of sequenced eukaryotic genomes
- List of sequenced plant genomes
External links
- Fungal Genome Initiative (includes draft genomes)
- UniProt query (complete proteome and fungi)
References
- ↑ Galagan JE, Calvo SE, Borkovich KA, Selker EU, Read ND, Jaffe D et al. (2003). "The genome sequence of the filamentous fungus Neurospora crassa". Nature 422 (6934): 859–68. doi:10.1038/nature01554. PMID 12712197.
- ↑ JGI entry
- ↑ Gostinčar, Cene; Ohm, Robin A.; Kogej, Tina; Sonjak, Silva; Turk, Martina; Zajc, Janja; Zalar, Polona; Grube, Martin; Sun, Hui (2014-07-01). "Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species". BMC Genomics (in English) 15 (1): 549. doi:10.1186/1471-2164-15-549. ISSN 1471-2164. PMID 24984952. Retrieved 2015-04-10.
- ↑ Lenassi M, Gostinčar C, Jackman S, Turk M, Sadowski I, Nislow C et al. (2013). "Whole genome duplication and enrichment of metal cation transporters revealed by de novo genome sequencing of extremely halotolerant black yeast Hortaea werneckii". PLoS ONE 8 (8): e71328. Bibcode:2013PLoSO...871328L. doi:10.1371/journal.pone.0071328. PMC 3744574. PMID 23977017. Vancouver style error (help)
- ↑ Rouxel T, Grandaubert J, Hane JK, Hoede C, van de Wouw AP, Couloux A et al. (2011). "Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations". Nat Commun 2 (2): 202. Bibcode:2011NatCo...2E.202R. doi:10.1038/ncomms1189. PMC 3105345. PMID 21326234.
- ↑ "Tools to kill: genome of one of the most destructive plant pathogenic fungi Macrophomina phaseolina". BMC Genomics 13 (1): 493. 2012. doi:10.1186/1471-2164-13-493. PMC 3477038. PMID 22992219.
- ↑ JGI entry
- ↑ Goodwin SB, M'barek SB, Dhillon B, Wittenberg AH, Crane CF, Hane JK et al. (2011). "Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis". PLoS Genet. 7 (6): e1002070. doi:10.1371/journal.pgen.1002070. PMC 3111534. PMID 21695235.
- ↑ Hane JK, Lowe RG, Solomon PS, Tan KC, Schoch CL, Spatafora JW et al. (2007). "Dothideomycete plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum". Plant Cell 19 (11): 3347–68. doi:10.1105/tpc.107.052829. PMC 2174895. PMID 18024570.
- ↑ http://www.diark.org/diark/species_list/Pyrenophora_tritici_repentis_Pt_1C_BFP
- ↑ http://genomesonline.org/cgi-bin/GOLD/bin/GOLDCards.cgi?goldstamp=Gi01094
- ↑ http://genomesonline.org/cgi-bin/GOLD/bin/GOLDCards.cgi?goldstamp=Gi01787
- ↑ http://genomesonline.org/cgi-bin/GOLD/bin/GOLDCards.cgi?goldstamp=Gc01529
- ↑ 14.0 14.1 Martinez DA, Oliver BG, Gräser Y, Goldberg JM, Li W, Martinez-Rossi NM et al. (2012). "Comparative genome analysis of Trichophyton rubrum and related dermatophytes reveals candidate genes involved in infection". MBio 3 (5): e00259–12. doi:10.1128/mBio.00259-12. PMC 3445971. PMID 22951933. Vancouver style error (help)
- ↑ JGI entry
- ↑ JGI entry
- ↑ 17.0 17.1 17.2 Fedorova ND, Khaldi N, Joardar VS, Maiti R, Amedeo P, Anderson MJ et al. (2008). "Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus". PLoS Genet. 4 (4): e1000046. doi:10.1371/journal.pgen.1000046. PMC 2289846. PMID 18404212.
- ↑ Nierman WC, Pain A, Anderson MJ, Wortman JR, Kim HS, Arroyo J et al. (2005). "Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus". Nature 438 (7071): 1151–6. Bibcode:2005Natur.438.1151N. doi:10.1038/nature04332. PMID 16372009.
- ↑ Futagami T, Mori K, Yamashita A, Wada S, Kajiwara Y, Takashita H et al. (2011). "Genome sequence of the white koji mold Aspergillus kawachii IFO 4308, used for brewing the Japanese distilled spirit shochu". Eukaryotic Cell 10 (11): 1586–7. doi:10.1128/EC.05224-11. PMC 3209066. PMID 22045919.
- ↑ Galagan JE, Calvo SE, Cuomo C, Ma LJ, Wortman JR, Batzoglou S et al. (2005). "Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae". Nature 438 (7071): 1105–15. Bibcode:2005Natur.438.1105G. doi:10.1038/nature04341. PMID 16372000.
- ↑ Pel HJ, de Winde JH, Archer DB, Dyer PS, Hofmann G, Schaap PJ et al. (2007). "Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88". Nat. Biotechnol. 25 (2): 221–31. doi:10.1038/nbt1282. PMID 17259976.
- ↑ Machida M, Asai K, Sano M, Tanaka T, Kumagai T, Terai G et al. (2005). "Genome sequencing and analysis of Aspergillus oryzae". Nature 438 (7071): 1157–61. doi:10.1038/nature04300. PMID 16372010.
- ↑ http://www.diark.org/diark/species_list/Aspergillus_terreus_NIH2624
- ↑ 24.0 24.1 24.2 Sharpton TJ, Stajich JE, Rounsley SD, Gardner MJ, Wortman JR, Jordar VS et al. (2009). "Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives". Genome Res. 19 (10): 1722–31. doi:10.1101/gr.087551.108. PMC 2765278. PMID 19717792.
- ↑ Desjardins CA, Champion MD, Holder JW, Muszewska A, Goldberg J, Bailão AM et al. (2011). "Comparative genomic analysis of human fungal pathogens causing paracoccidioidomycosis". PLoS Genet. 7 (10): e1002345. doi:10.1371/journal.pgen.1002345. PMC 3203195. PMID 22046142. Vancouver style error (help)
- ↑ van den Berg MA, Albang R, Albermann K, Badger JH, Daran JM, Driessen AJ et al. (2008). "Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum". Nat. Biotechnol. 26 (10): 1161–8. doi:10.1038/nbt.1498. PMID 18820685.
- ↑ 27.0 27.1 Marcet-Houben M, Ballester AR, de la Fuente B, Harries E, Marcos JF, González-Candelas L et al. (2012). "Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus". BMC Genomics 13: 646. doi:10.1186/1471-2164-13-646. PMC 3532085. PMID 23171342. Vancouver style error (help)
- ↑ 28.0 28.1 Espagne E, Lespinet O, Malagnac F, Da Silva C, Jaillon O, Porcel BM et al. (2008). "The genome sequence of the model ascomycete fungus Podospora anserina". Genome Biol. 9 (5): R77. doi:10.1186/gb-2008-9-5-r77. PMC 2441463. PMID 18460219.
- ↑ 29.0 29.1 Amselem J, Cuomo CA, van Kan JA, Viaud M, Benito EP, Couloux A et al. (2011). "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea". PLoS Genet. 7 (8): e1002230. doi:10.1371/journal.pgen.1002230. PMC 3158057. PMID 21876677.
- ↑ Youssar L, Grüning BA, Erxleben A, Günther S, Hüttel W (2012). "Genome sequence of the fungus Glarea lozoyensis: the first genome sequence of a species from the Helotiaceae family". Eukaryotic Cell 11 (2): 250. doi:10.1128/EC.05302-11. PMC 3272893. PMID 22302591. Vancouver style error (help)
- ↑ Gianoulis TA, Griffin MA, Spakowicz DJ, Dunican BF, Alpha CJ, Sboner A et al. (2012). "Genomic analysis of the hydrocarbon-producing, cellulolytic, endophytic fungus Ascocoryne sarcoides". PLoS Genet. 8 (3): e1002558. doi:10.1371/journal.pgen.1002558. PMC 3291568. PMID 22396667.
- ↑ Martin F, Kohler A, Murat C, Balestrini R, Coutinho PM, Jaillon O et al. (2010). "Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis". Nature 464 (7291): 1033–8. doi:10.1038/nature08867. PMID 20348908.
- ↑ Dietrich FS, Voegeli S, Brachat S, Lerch A, Gates K, Steiner S et al. (2004). "The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome". Science 304 (5668): 304–7. Bibcode:2004Sci...304..304D. doi:10.1126/science.1095781. PMID 15001715.
- ↑ 34.0 34.1 34.2 34.3 34.4 34.5 Butler G, Rasmussen MD, Lin MF, Santos MA, Sakthikumar S, Munro CA et al. (2009). "Evolution of pathogenicity and sexual reproduction in eight Candida genomes". Nature 459 (7247): 657–62. Bibcode:2009Natur.459..657B. doi:10.1038/nature08064. PMC 2834264. PMID 19465905.
- ↑ EBI project page
- ↑ 36.0 36.1 36.2 36.3 Dujon B, Sherman D, Fischer G, Durrens P, Casaregola S, Lafontaine I et al. (2004). "Genome evolution in yeasts". Nature 430 (6995): 35–44. Bibcode:2004Natur.430...35D. doi:10.1038/nature02579. PMID 15229592.
- ↑ Riccombeni A, Vidanes G, Proux-Wéra E, Wolfe KH, Butler G (2012). "Sequence and analysis of the genome of the pathogenic yeast Candida orthopsilosis". PLoS ONE 7 (4): e35750. doi:10.1371/journal.pone.0035750. PMC 3338533. PMID 22563396. Vancouver style error (help)
- ↑ Kumar S, Randhawa A, Ganesan K, Raghava GP, Mondal AK (2012). "Draft genome sequence of salt-tolerant yeast Debaryomyces hansenii var. hansenii MTCC 234". Eukaryotic Cell 11 (7): 961–2. doi:10.1128/EC.00137-12. PMC 3416502. PMID 22744717.
- ↑ Piskur J; Ling Z; Marcet-Houben M et al. (2012). "The genome of wine yeast Dekkera bruxellensis provides a tool to explore its food-related properties". Int J Food Microbiol.
- ↑ JGI entry
- ↑ http://genomesonline.org/cgi-bin/GOLD/bin/GOLDCards.cgi?goldstamp=Gc01520
- ↑ http://genomesonline.org/cgi-bin/GOLD/bin/GOLDCards.cgi?goldstamp=Gc01521
- ↑ Souciet JL, Dujon B, Gaillardin C, Johnston M, Baret PV, Cliften P et al. (2009). "Comparative genomics of protoploid Saccharomycetaceae". Genome Res. 19 (10): 1696–709. doi:10.1101/gr.091546.109. PMC 2765284. PMID 19525356.
- ↑ 44.0 44.1 44.2 44.3 Cliften P, Sudarsanam P, Desikan A, Fulton L, Fulton B, Majors J et al. (2003). "Finding functional features in Saccharomyces genomes by phylogenetic footprinting". Science 301 (5629): 71–6. Bibcode:2003Sci...301...71C. doi:10.1126/science.1084337. PMID 12775844.
- ↑ 45.0 45.1 45.2 45.3 Gordon JL, Armisén D, Proux-Wéra E, ÓhÉigeartaigh SS, Byrne KP, Wolfe KH (2011). "Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents". Proc. Natl. Acad. Sci. U.S.A. 108 (50): 20024–9. Bibcode:2011PNAS..10820024G. doi:10.1073/pnas.1112808108. PMC 3250169. PMID 22123960. Vancouver style error (help)
- ↑ 46.0 46.1 46.2 Kellis M, Patterson N, Endrizzi M, Birren B, Lander ES (2003). "Sequencing and comparison of yeast species to identify genes and regulatory elements". Nature 423 (6937): 241–54. Bibcode:2003Natur.423..241K. doi:10.1038/nature01644. PMID 12748633.
- ↑ 47.0 47.1 47.2 Scannell DR, Zill OA, Rokas A, Payen C, Dunham MJ, Eisen MB et al. (2011). "The Awesome Power of Yeast Evolutionary Genetics: New Genome Sequences and Strain Resources for the Saccharomyces sensu stricto Genus". G3 (Bethesda) 1 (1): 11–25. doi:10.1534/g3.111.000273. PMC 3276118. PMID 22384314.
- ↑ Liti G, Nguyen Ba AN, Blythe M, Müller CA, Bergström A, Cubillos FA et al. (2013). "High quality de novo sequencing and assembly of the Saccharomyces arboricolus genome". BMC Genomics 14 (1): 69. doi:10.1186/1471-2164-14-69. PMC 3599269. PMID 23368932. Vancouver style error (help)
- ↑ Argueso JL, Carazzolle MF, Mieczkowski PA, Duarte FM, Netto OV, Missawa SK et al. (2009). "Genome structure of a Saccharomyces cerevisiae strain widely used in bioethanol production". Genome Res. 19 (12): 2258–70. doi:10.1101/gr.091777.109. PMC 2792172. PMID 19812109.
- ↑ Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H et al. (1996). "Life with 6000 genes". Science 274 (5287): 546, 563–7. Bibcode:1996Sci...274..546G. doi:10.1126/science.274.5287.546. PMID 8849441.
- ↑ Dowell RD, Ryan O, Jansen A, Cheung D, Agarwala S, Danford T et al. (2010). "Genotype to phenotype: a complex problem". Science 328 (5977): 469. Bibcode:2010Sci...328..469D. doi:10.1126/science.1189015. PMID 20413493.
- ↑ Liti G, Carter DM, Moses AM, Warringer J, Parts L, James SA et al. (2009). "Population genomics of domestic and wild yeasts". Nature 458 (7236): 337–41. Bibcode:2009Natur.458..337L. doi:10.1038/nature07743. PMC 2659681. PMID 19212322.
- ↑ Nakao Y, Kanamori T, Itoh T, Kodama Y, Rainieri S, Nakamura N et al. (2009). "Genome sequence of the lager brewing yeast, an interspecies hybrid". DNA Res. 16 (2): 115–29. doi:10.1093/dnares/dsp003. PMC 2673734. PMID 19261625.
- ↑ Jeffries TW, Grigoriev IV, Grimwood J, Laplaza JM, Aerts A, Salamov A et al. (2007). "Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis". Nat. Biotechnol. 25 (3): 319–26. doi:10.1038/nbt1290. PMID 17334359.
- ↑ JGI entry
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