Interleukin 12 subunit beta

Interleukin 12B

PDB rendering based on 1f42.
Available structures
PDB Ortholog search: PDBe, RCSB
Identifiers
SymbolsIL12B ; CLMF; CLMF2; IL-12B; NKSF; NKSF2
External IDsOMIM: 161561 MGI: 96540 HomoloGene: 1648 GeneCards: IL12B Gene
RNA expression pattern
More reference expression data
Orthologs
SpeciesHumanMouse
Entrez359316160
EnsemblENSG00000113302ENSMUSG00000004296
UniProtP29460P43432
RefSeq (mRNA)NM_002187NM_008352
RefSeq (protein)NP_002178NP_032378
Location (UCSC)Chr 5:
158.74 – 158.76 Mb
Chr 11:
44.4 – 44.41 Mb
PubMed search

Subunit beta of interleukin 12 (also known as IL-12B, natural killer cell stimulatory factor 2, or cytotoxic lymphocyte maturation factor 2, p40) is a protein that in humans is encoded by the IL12B gene. IL-12B is a subunit of interleukin 12.

Function

This gene encodes a subunit of interleukin 12, a cytokine that acts on T and natural killer cells, and has a broad array of biological activities. Interleukin 12 is a disulfide-linked heterodimer composed of the 40 kD cytokine receptor like subunit encoded by this gene, and a 35 kD subunit encoded by IL12A. This cytokine is expressed by activated macrophages that serve as an essential inducer of Th1 cells development. This cytokine has been found to be important for sustaining a sufficient number of memory/effector Th1 cells to mediate long-term protection to an intracellular pathogen. Overexpression of this gene was observed in the central nervous system of patients with multiple sclerosis (MS), suggesting a role of this cytokine in the pathogenesis of the disease. The promoter gene polymorphism of this gene has been reported to be associated with the severity of atopic and non-atopic asthma in children.[1]

Structure

Editing results in an amino acid change from an alanine to a valine may cause a conformational change in the IL12 receptor.[2]

Function

Editing causes a reduction in the extent of IL-12 signaling as the β subunit is involved in signal transduction. This leads to insufficient IFN-γ production, possibly due to an interruption of the binding of IL-12 to its receptor. Binding may be restricted due to a conformational change caused by the change of amino acid. The change in the signaling cascade and reduction of IFN-γ effects downregulation of IgE. Atrophy patients have enhanced IgE sensitivity to everyday environmental factors such as asthma. This is the only editing event linked to atrophy.[2]

RNA editing

Interleukin 12 receptor, beta 2 subunit(IL12Rβ2) is a product of the IL12-R β2 gene. As previously mentioned, the gene product is one of two subunits which combine to form the IL-12 receptor.The other subunit being IL12-R β1 subunit.[3] The β2 subunit is only expressed in Th1 lymphocytes.The pre-mRNA of the IL12-R β2 gene is subject to RNA editing.

Editing type

Cytidine to Uridine (C to U) RNA editing.

Editing sites

The editing site is located at nucleotide 2451 which is found in exon 13 which forms part of the extracellular domain of the protein.[2] However another report was unable to detect this C to U conversion[4]

Role as IL-23 subunit

Interleukin-12 p40 also serves as a subunit of Interleukin 23.[5]

Clinical significance

There is an increase in the frequency of editing in Atopic patients (20.6%) from that non atopic patients (3.8%) transcripts.This is the first reported case that indicates that atopy could be associated with RNA editing.Atopy is characterized by enhanced immunoglobulin E (IgE) responses to common environmental antigens and leads to clinical disorders such as asthma, eczema and rhinitis.[2]

References

  1. "Entrez Gene: IL12B interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)".
  2. 2.0 2.1 2.2 2.3 Kondo N, Matsui E, Kaneko H, Aoki M, Kato Z, Fukao T, Kasahara K, Morimoto N (March 2004). "RNA editing of interleukin-12 receptor beta2, 2451 C-to-U (Ala 604 Val) conversion, associated with atopy". Clin. Exp. Allergy 34 (3): 363–8. doi:10.1111/j.1365-2222.2004.01901.x. PMID 15005728.
  3. Presky DH, Yang H, Minetti LJ, Chua AO, Nabavi N, Wu CY, Gately MK, Gubler U (November 1996). "A functional interleukin 12 receptor complex is composed of two β-type cytokine receptor subunits". Proc. Natl. Acad. Sci. U.S.A. 93 (24): 14002–7. doi:10.1073/pnas.93.24.14002. PMC 19484. PMID 8943050.
  4. Kim EJ, Lee WM, Ha JS, Ryoo NH, Jeon DS, Kim JR (December 2006). "mRNA Expression and RNA Editing (2451 C-to-U) of IL-12 Receptor β2 in Adult Atopic Patients". J. Korean Med. Sci. 21 (6): 1070–4. doi:10.3346/jkms.2006.21.6.1070. PMC 2721931. PMID 17179689.
  5. Oppmann B, Lesley R, Blom B, Timans JC, Xu Y, Hunte B, Vega F, Yu N, Wang J, Singh K, Zonin F, Vaisberg E, Churakova T, Liu M, Gorman D, Wagner J, Zurawski S, Liu Y, Abrams JS, Moore KW, Rennick D, de Waal-Malefyt R, Hannum C, Bazan JF, Kastelein RA (November 2000). "Novel p19 protein engages IL-12p40 to form a cytokine, IL-23, with biological activities similar as well as distinct from IL-12". Immunity 13 (5): 715–25. doi:10.1016/S1074-7613(00)00070-4. PMID 11114383.

Further reading