Eckard Wimmer

For other uses, see Wimmer.
Eckard Wimmer
Born 22 May 1936
Berlin, Germany
Residence New York
Fields Biology, Virology
Institutions Stony Brook University
Alma mater Göttingen University
Known for First de novo synthesis of Poliovirus
Notable awards M.W. Beijerinck Virology Prize 2011
Koch Gold Medal 2012
Website
www.mgm.stonybrook.edu/wimmer

Eckard Wimmer (born 22 May 1936) is a German American virologist, organic chemist and distinguished professor of molecular genetics and microbiology at Stony Brook University. He is best known for his seminal work on the molecular biology of poliovirus and the first chemical synthesis of a viral genome capable of infection and subsequent production of live viruses.

Life and career

Eckard Albert Friedrich Wimmer was born on May 22, 1936 in Berlin, Germany. At the onset of World War II, Wimmer at age three lost his father; at age nine, his mother fled together with his two older brothers to Saxony, East Germany, where he finished elementary school and high school. He studied Chemistry at the University of Rostock from 1953 to 1956, and then fled to West Germany to continue his Chemistry studies at University of Göttingen. In 1962 he earned the degree of Doctor rerum naturalium (Dr. rer. nat.) in the Organic Chemistry of natural products under the guidance of Hans Brockmann.

Wimmer worked at the University of Göttingen as a research associate and instructor until 1964. Intrigued by the chemistry of living cells, however, he shifted his research interests in 1964 and joined Gordon Tener at the Department of Biochemistry of the University of British Columbia in Vancouver, Canada, to study transfer RNA. Then in 1966 he worked with Manfred E. Reichmann in the Department of Botany at the University of Illinois to study plant viruses.

In 1968, during a five-months visit in David Baltimore’s laboratory at MIT, Wimmer was introduced to poliovirus, the infectious agent of his choice until today. Between 1968 and 1974 he taught and conducted research in the Department of Microbiology in the Saint Louis University School of Medicine in Missouri. He and his family moved to Stony Brook University on Long Island, NY, in 1974 to join the Department of Microbiology, School of Medicine, an academic environment in which he is still actively engaged today. In 1979 he was promoted to professor at Stony Brook University and from 1984 to 1999 he served as the Chairman of the Department. Wimmer was honored as a Distinguished Professor of the State University of New York at Stony Brook in 2002.[1]
Wimmer is married since 1965 to Astrid née Brose, a German physical therapist, who earned her Ph.D. in Comparative Literature at Stony Brook University in 1988. They have two children.

Research interests

Originally trained as an organic chemist, Wimmer developed a deep understanding and fascination for viruses as replicating (living) biological entities as well as (non-living) aggregates of organic compounds, or, “as chemicals with a life cycle”.[2][3] After working on the structure of tRNAs and the structure of a plant RNA virus (satellite tobacco necrosis virus), Wimmer chose to study poliovirus in 1968. Poliovirus is the cause of the horrific disease poliomyelitis, which can cause irreversible flaccid paralysis and even death. Neither the molecular biology of poliovirus proliferation nor the mechanism of its pathogenesis was understood in the nineteen sixties.

Wimmer’s major early accomplishment, spearheaded by Naomi Kitamura and other members of his laboratory, was the elucidation in 1981 of the structure and genetic organization of the poliovirus genome,[4] the first sequence of a eukaryotic RNA virus. The primary structure of the genome was unique at the time amongst RNA viruses as it was 3’ polyadenylated[5] and 5’ covalently linked to a protein called VPg.[6] VPg was later shown by Aniko Paul to be a primer in RNA replication.[7] The resulting gene map provided irrefutable evidence for the existence of the polyprotein, the only polypeptide that poliovirus synthesizes. Polyproteins, first postulated by David Baltimore, are a hallmark of gene expression in many viruses and in all retroviruses. Wimmer’s lab not only provided proof of the polyprotein but also largely identified the pathway by which the polyprotein is processed into functional polypeptides,[8] where Bert L. Semler showed that the cleavages occur predominantly at evolutionary preserved Q^G sites. These studies were the basis for the discovery of the “internal ribosome entry site” (IRES) in a picornavirus genome by Sung Key Jang (1988),[9][10] independently described also by Nahum Sonenberg and his colleagues. IRES elements allow initiation of protein synthesis in a cap-independent manner, which violates a long-standing dogma in protein synthesis of eukaryotic cells. IRESes have now found widespread recognition in cell biology and application in biotechnology. An IRES chimeric oncolytic poliovirus [PV(RIPO)], originally constructed in Wimmer’s laboratory,[11] has now been developed by Matthias Gromeier at Duke University for the treatment of human glioma.

Wimmer is co-discoverer of the poliovirus receptor CD155,[12] a cell-adhesion molecule[13] and tumor antigen, whose expression is regulated by the sonic hedgehog pathway.[14] A decade-long collaboration with Michael Rossmann’s laboratory and Steffen Mueller in Wimmer's lab has yielded the crystal structure of the two outer domains of CD155, an achievement that has solved the architecture of the poliovirus/receptor complex.[15]

In 1991, Molla, Paul and Wimmer published the first de novo, cell-free synthesis of any virus.[2][16] This experiment has led to biochemical studies of the complete poliovirus life cycle in cytoplasmic extracts of naïve mammalian cells. Many investigators have since used this strategy involving a cell “juice” void of the barrier of a cellular membrane, of nuclei or of mitochondria, for the study of key steps in poliovirus translation and genome replication.

Using the nucleotide sequence of the genome deciphered in 1981, Wimmer followed up on the work published in 1991 by synthesizing chemically the genome in the form of double stranded DNA (“cDNA”), which was then transcribed enzymatically[16] into genome RNA and “booted to life” in the cell free system.[3] This work, published in 2002 by Cello, Paul and Wimmer, was the first test-tube synthesis of an organism in the absence of a natural template achieved outside living cells.[3] The poliovirus synthesis caught global attention, high praise, ridicule and fierce condemnation.[17] Several years later, Wimmer published an essay in EMBO Reports reflecting on hotly debated issues that this new kind of research generated (ethical matters, questions about the global eradication of poliovirus, concerns of “dual use research”).[18] Apart from providing a ‘proof of principle,’ the experiment heralded the total synthesis of organisms with computers as parents, a strategy that allows investigating the structure and function of an organism’s biology to an extent hitherto impossible.[19] Meanwhile, synthetic biology has led to a new kind of RNA virus genetics[20] and has been used to develop rapid methods for computer-aided chemical synthesis of viral recoded genomes. This strategy allows for the generation of new vaccines in a very short time.[21][22][23]

Recently, Wimmer’s lab has elucidated the key step in the morphogenesis of poliovirus that has been elusive for decades.[24]

Awards and honors

Bibliography

External links

Synthesis of Poliovirus

References

  1. ↑ 1.0 1.1 Gupta, Sujata (5 February 2013). "Profile of Eckard Wimmer". Proceedings of the National Academy of Sciences of the United States of America 110 (6): 1973–1975. doi:10.1073/pnas.1221558110. PMC 3568298. PMID 23277540. Retrieved 24 April 2013.
  2. ↑ 2.0 2.1 Molla, Akhteruzzaman; Paul, A.V. and Wimmer, Eckard (1991). "Cell free, de novo synthesis of poliovirus". Science 254 (5038): 1647–1651. doi:10.1126/science.1661029. PMID 1661029.
  3. ↑ 3.0 3.1 3.2 Cello, j; Paul, A. and Wimmer, Eckard (2002). "Chemical synthesis of poliovirus cDNA: generation of infectious virus in the absence of natural template". Science 297 (5583): 1016–1018. doi:10.1126/science.1072266. PMID 12114528.
  4. ↑ Yogo, Y; Wimmer, Eckard (1972). "Sequence studies of Poliovirus RNA II Polyadenylic Acis at 3'-Terminus of Poliovirus RNA". Proceedings of the National Academy of Sciences of the United States of America 69: 1877–1882. doi:10.1073/pnas.69.7.1877.
  5. ↑ Lee, Y.F.; Nomoto, A., Detjen, B.M. and Wimmer, E. (1977). "A protein covalently linked to poliovirus genome RNA". Proc. Natl. Acad. Sci. U.S.A. 74: 59–63. doi:10.1073/pnas.74.1.59.
  6. ↑ Kitamura, N.; Semler, B. L., Rothberg, P. G., Larsen, G. R., Adler, C. J., Dorner, A. J., Emini, E. A., Hanecak, R., Lee, J. J., van der Werf, S., Anderson, C. W. and Wimmer, E (1981). ". Primary structure, gene organization and polypeptide expression of poliovirus RNA". Nature 291 (5816): 547–553. doi:10.1038/291547a0. PMID 6264310.
  7. ↑ Paul, Aniko V.; v. Boom, J., Filippov, D., and Wimmer, E. (1998). "Protein-primed RNA Synthesis by Purified Poliovirus RNA Polymerase". Nature 393 (6682): 280–4. doi:10.1038/30529. PMID 9607767.
  8. ↑ Kräusslich; Wimmer, E (1988). "Viral Proteinases". Ann. Rev. Biochem 57: 701–754. doi:10.1146/annurev.bi.57.070188.003413. PMID 3052288.
  9. ↑ Jang, S.K.; Kräusslich, H.-G., Nicklin, M. J. H., Duke, G. M., Palmenberg, A. C. and Wimmer, E. (1988). "Evidence in Vitro for Internal Entry by the Translational Machinery in the 5' Non-Translated Region of Encephalomyocarditis Virus RNA". J. Virol. 62: 2636–2643.
  10. ↑ Davies, S.K.; Davies, M.V., Kaufman, R.J. and Wimmer, E (1989). "Initiation of Protein Synthesis by Internal Entry of Ribosomes into the 5' Non- translated Region of Encephalomyocarditis Virus RNA In Vivo.". J. Virol. 63: 1651–1660.
  11. ↑ Gromeier, M.; Lachmann, S.; Rosenfeld, M. R.; Gutin, P. H.; Wimmer, E (2000). "Intergeneric Poliovirus Recombinants for the Treatment of Malignant Glioma". Proc. Natl. Acad. Sci. U.S.A. 97: 6803–6808. doi:10.1073/pnas.97.12.6803. PMC 18745. PMID 10841575. Retrieved 19 April 2013.
  12. ↑ Mendelsohn, C.L.; Wimmer, E.; Racaniello, V.R. (1989). "Cellular Receptor for Poliovirus: Molecular Cloning, Nucleotide Sequence, and Expression of a New Member of the Immunoglobulin Super-family". Cell 56 (5): 855–865. doi:10.1016/0092-8674(89)90690-9. PMID 2538245.
  13. ↑ Mueller, S.; Wimmer, E. (2003). "Recruitment of Nectin-3 to cell-cell junctions through trans-heterophilic interaction with CD155, a vitronectin and poliovirus receptor that localizes to αvβ3 integrin containing membrane microdomains". J. Biol. Chem. 278 (33): 31251–31260. doi:10.1074/jbc.M304166200. PMID 12759359.
  14. ↑ Solecki, D.; Gromeier, M., Mueller. S., Bernhardt,G., and Wimmer., E (2002). "Expression of the human poliovirus receptor/CD155 gene is activated by Sonic Hedgehog". J. Biol. Chem. 277: 25697–25702. doi:10.1074/jbc.m201378200.
  15. ↑ Zhang, P.; Mueller, S.; Morais, M. C.; Bator, C. M.; Bowman, V. D.; Hafenstein, S.; Wimmer, E.; Rossmann, M. G (2008). "Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses". Proc. Natl. Acad. Sci. U.S.A. 105: 18284–18289. doi:10.1073/pnas.0807848105. PMC 2587566. PMID 19011098. Retrieved 19 April 2013.
  16. ↑ 16.0 16.1 S. Bradley, J. Wimmer, E., Studier, F. W., and Dunn, J. J. (1986). "Synthesis of Infectious Poliovirus RNA by Purified T7 RNA Polymerase". Proc. Natl. Acad. Sci. U.S.A. 83: 2330–2334. doi:10.1073/pnas.83.8.2330.
  17. ↑ Pollack, Andrew. "SCIENTISTS CREATE A LIVE POLIO VIRUS". The New York Times. Retrieved 19 April 2013.
  18. ↑ Wimmer, Eckard (2006). "The test-tube synthesis of poliovirus: The simple synthesis of a virus has far reaching societal implications". EMBO Reports 7: S3–S9. doi:10.1038/sj.embor.7400728.
  19. ↑ Wimmer, Eckard; Paul, A. (2011). "Synthetic poliovirus and other designer viruses: what have we learned from them?". Annu. Rev. Microbiol. 65: 583–609. doi:10.1146/annurev-micro-090110-102957.
  20. ↑ Song, Y; Liu, Y., Ward, C.B., Mueller, S., Futcher, B., Skiena, Paul., A.V., and Wimmer, E (4 September 2012). "Identification of two functionally redundant RNA elements in the coding sequence of poliovirus using computer generated design". Proc. Natl. Acad. Sci. U.S.A. 109 (36): 14301–14307. doi:10.1073/pnas.1211484109.
  21. ↑ Meuller, S; Papamichael D; Coleman JR; Skiena S; Wimmer E (2006). "Reduction of the rate of poliovirus protein synthesis through large scale codon deoptimization causes attenuation of viral virulence by lowering specific infectivity". J. Virol. 80: 9687–9696. doi:10.1128/jvi.00738-06.
  22. ↑ Coleman, JR; Papamichail D; Skiena S; Futcher B; Wimmer E; Mueller S. (2008). "Virus attenuation by genome-scale changes in codon pair bias". Science 320 (5884): 1784–1787. doi:10.1126/science.1155761. PMC 2754401. PMID 18583614. Retrieved 19 April 2013.
  23. ↑ Mueller, S; Coleman, J.R.; Papamichail, D.; Ward, C. B.; Nimnual, A.; Futcher, B.; Skiena, S.; Wimmer, E (2010). "Live attenuated influenza virus vaccines by computer-aided rational design". Nat. Biotechn. 28: 723–727. doi:10.1038/nbt.1636.
  24. ↑ Liu, Y.; Wang, C.; Mueller, S.; Paul, A.; Wimmer, E.; Jiang, P (2010). "A direct interaction between proteins 2CATPase and VP3 is required for enterovirus morphogenesis". PloS Path 6 (8).