2D gel analysis software
This page is a subsection of Gel electrophoresis.
2D gel analysis software typically serve four purposes:
- analyze bio-markers by quantifying individual proteins
- showing the separation between one or more protein "spots" on a scanned image of a 2-DE gel
- match spots between gels of similar samples to show, for example, proteomic differences between early and advanced stages of an illness
- in depth analysis
Alignment viewers/editors
| Name | Formats Supported | Table of features | License | Link | Developers |
|---|---|---|---|---|---|
| BioNumerics 2D | 2-D gel TIFF files | table of features | commercial | link | Applied Maths |
| Delta2D | commercial | link | Decodon | ||
| ImageMaster 2D | commercial | link | GE Healthcare | ||
| Melanie | table of features | commercial | link | Geneva Bioinformatics (GeneBio) | |
| PDQuest | commercial | link | Bio-Rad Laboratories | ||
| Progenesis Samespots | commercial | link | Nonlinear Dynamics | ||
| REDFIN | commercial | link | Ludesi | ||
See also
- Sequence alignment software
- Biological data visualization