Rolf Apweiler

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Rolf Apweiler
Fields Bioinformatics, Biochemistry and Proteomics
Institutions European Bioinformatics Institute
University of Heidelberg
Alma mater University of Heidelberg
Doctoral students Garth Ilsey (2010)[1]
Michael Mueller (2009)[2][3]
Evgenia Kriventseva (2004)[4][5]
Steffen Möller (2001)[6][7]
Known for Swiss-Prot
TrEMBL
UniProt[8][9]
InterPro[10]
Website
pir.uniprot.org/help/apweiler
www.ebi.ac.uk/about/people/rolf-apweiler
Rolf Apweiler is joint associate director of the European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI) [11][12] with Ewan Birney.

Education

Apweiler gained his PhD in Biochemistry from the University of Heidelberg.[13]

Research

Apweiler has been working on the Swiss-Prot[14] protein sequence database since 1987, and in 1994 he became leader of the Swiss-Prot group. He has been joint head of the Protein and Nucleotide Data (PANDA) Group since 2007. The PANDA group is involved in several international collaborations like the Human Proteome Organization (HUPO) Proteomics Standards Initiative. Apweiler is a member of the Nomenclature Committee of IUBMB, the FlyBase advisory board, the committee of the Helmholtz Centre for Infection Research (HZI) and the advisory board of the Human Proteome Resource (HPR).

Apweiler is an editor of the FEBS Journal and a section editor of BMC Bioinformatics and has published more than 200 papers[15][16][17]

References

  1. ↑ Ilsey, Garth (2010). A statistical model relating transcription factor concentrations to positional information in the early Drosophila embryo (Ph.D. thesis). University of Cambridge. 
  2. ↑ Mueller, Michael (2009). Integrated analysis of proteomics data to assess and improve the scope of mass spectrometry based genome annotation (Ph.D. thesis). University of Cambridge. 
  3. ↑ Mueller, M.; Martens, L.; Apweiler, R. (2007). "Annotating the human proteome: Beyond establishing a parts list". Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics 1774 (2): 175–191. doi:10.1016/j.bbapap.2006.11.011. PMID 17223395. 
  4. ↑ Evgenia, Kriventseva (2004). Computational analysis of complete proteomes by clustering and analysis of alternative splicing impact on proteome diversity (Ph.D. thesis). University of Cambridge. 
  5. ↑ Kriventseva, E. V.; Servant, F.; Apweiler, R. (2003). "Improvements to CluSTr: The database of SWISS-PROT+TrEMBL protein clusters". Nucleic Acids Research 31 (1): 388–389. doi:10.1093/nar/gkg035. PMC 165482. PMID 12520029. 
  6. ↑ Möller, Steffen (2001). An environment for consistent sequence annotation and its application to transmembrane proteins (Ph.D. thesis). University of Cambridge. 
  7. ↑ Möller, S.; Croning, M. D.; Apweiler, R. (2001). "Evaluation of methods for the prediction of membrane spanning regions". Bioinformatics (Oxford, England) 17 (7): 646–653. PMID 11448883. 
  8. ↑ "Rolf Apweiler - ScienceWatch.com". Retrieved 27 June 2011. 
  9. ↑ Bairoch, A.; Apweiler, R.; Wu, C. H.; Barker, W. C.; Boeckmann, B.; Ferro, S.; Gasteiger, E.; Huang, H.; Lopez, R.; Magrane, M.; Martin, M. J.; Natale, D. A.; O'Donovan, C.; Redaschi, N.; Yeh, L. S. (2004). "The Universal Protein Resource (UniProt)". Nucleic Acids Research 33 (Database issue): D154–D159. doi:10.1093/nar/gki070. PMC 540024. PMID 15608167. 
  10. ↑ Hunter, S.; Apweiler, R.; Attwood, T.; Bairoch, A.; Bateman, A.; Binns, D.; Bork, P.; Das, U.; Daugherty, L.; Duquenne, L.; Finn, R. D.; Gough, J.; Haft, D.; Hulo, N.; Kahn, D.; Kelly, E.; Laugraud, A.; Letunic, I.; Lonsdale, D.; Lopez, R.; Madera, M.; Maslen, J.; McAnulla, C.; McDowall, J.; Mistry, J.; Mitchell, A.; Mulder, N.; Natale, D.; Orengo, C.; Quinn, A. F. (Jan 2009). "InterPro: the integrative protein signature database" (Free full text). Nucleic Acids Research 37 (Database issue): D211–D215. doi:10.1093/nar/gkn785. ISSN 0305-1048. PMC 2686546. PMID 18940856. 
  11. ↑ http://www.ebi.ac.uk/Information/Staff/person_maint.php?s_person_id=54 Rolf Apweiler page at the EBI
  12. ↑ http://uk.linkedin.com/pub/rolf-apweiler/b/44/380 Rolf Apweiler LinkedIn profile
  13. ↑ http://pir.uniprot.org/help/apweiler Rolf Apweiler page at UniProt.org
  14. ↑ Boeckmann, B.; Bairoch, A.; Apweiler, R.; Blatter, M. C.; Estreicher, A.; Gasteiger, E.; Martin, M. J.; Michoud, K.; O'Donovan, C.; Phan, I.; Pilbout, S.; Schneider, M. (2003). "The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003". Nucleic Acids Research 31 (1): 365–370. doi:10.1093/nar/gkg095. PMC 165542. PMID 12520024. 
  15. ↑ http://scholar.google.com/scholar?q=rolf+apweiler Rolf Apweiler in Google Scholar
  16. ↑ http://www.informatik.uni-trier.de/~ley/db/indices/a-tree/a/Apweiler:Rolf.html Rolf Apweiler publication in DBLP
  17. ↑ http://www.biomedexperts.com/Profile.bme/44789/Rolf_Apweiler Rolf Apweiler profile in BiomedExperts
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