Proteomics Standards Initiative

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The Proteomics Standards Initiative (PSI) is a working group of HUPO. It aims to define data standards for proteomics in order to facilitate data comparison, exchange and verification.[2][3]

PSI focuses on the following subjects:

  • MIAPE, Minimum Information About a Proteomics Experiment, defines the metadata that should be provided along with a proteomics experiment.[4]
  • Data Markup Languages for encoding the data and metadata.
  • Ontologies for consistent annotation and representation.

References

  1. ↑ Strong, 1983,p. 9 & 156-7
  2. ↑ Taylor, C. F.; Hermjakob, H.; Julian, R. K.; Garavelli, J. S.; Aebersold, R.; Apweiler, R. (2006). "The Work of the Human Proteome Organisation's Proteomics Standards Initiative (HUPO PSI)". OMICS: A Journal of Integrative Biology 10 (2): 145–151. doi:10.1089/omi.2006.10.145. 
  3. ↑ "HUPO Proteomics Standards Initiative home page". HUPO Proteomics Standards Initiative. Retrieved 2008-12-06. 
  4. ↑ Taylor, C. F.; Paton, N. W.; Lilley, K. S.; Binz, P. A.; Julian Jr, R. K.; Jones, A. R.; Zhu, W.; Apweiler, R.; Aebersold, R.; Deutsch, E. W.; Dunn, M. J.; Heck, A. J. R.; Leitner, A.; Macht, M.; Mann, M.; Martens, L.; Neubert, T. A.; Patterson, S. D.; Ping, P.; Seymour, S. L.; Souda, P.; Tsugita, A.; Vandekerckhove, J.; Vondriska, T. M.; Whitelegge, J. P.; Wilkins, M. R.; Xenarios, I.; Yates Jr, J. R.; Hermjakob, H. (2007). "The minimum information about a proteomics experiment (MIAPE)". Nature Biotechnology 25 (8): 887–893. doi:10.1038/nbt1329. PMID 17687369. 


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