In taxonomy, the Methanosarcinaceae are a family of the Methanosarcinales.[1]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI)[3]
and the phylogeny is based on 16S rRNA-based LTP release 106 by 'The All-Species Living Tree' Project.[4]
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?Halomethanococcus doii ♦ Yu and Kawamura 1988 |
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?Methanohalobium evestigatum Zhilina and Zavarzin 1988 |
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Methanosalsum zhilinae (Mathrani et al. 1988) Boone and Baker 2002 |
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| Methanomethylovorans |
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?M. victoriae ♠ Muyodi et al. 2000 |
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M. hollandica Lomans et al. 2004 (type sp.) |
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M. thermophila Jiang et al. 2005 |
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Methanimicrococcus blatticola Sprenger et al. 2000 |
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| Methanosarcina |
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?M. horonobensis Shimizu et al. 2011 |
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?M. methanica (Smit 1930) Kluyver and van Niel 1936 (nom. rejic.) |
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?M. siciliae (Stetter and König 1989) Ni et al. 1994 emend. Elberson and Sowers 1997 |
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?M. vacuolata Zhilina and Zavarzin 1987 |
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M. semesiae Lyimo et al. 2000 |
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M. baltica von Klein et al. 2002 emend. Singh et al. 2005 |
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M. lacustris Simankova et al. 2002 |
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M. mazei (Barker 1936) Mah and Kuhn 1984 |
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| Methanococcoides |
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| Methanohalophilus |
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?M. euhalobius ♠ (Obraztsova et al. 1987) Davidova et al. 1997 |
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?M. halophilus (Zhilina 1984) Wilharm et al. 1991 |
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M. mahii Paterek and Smith 1988 (type sp.) |
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M. portucalensis Boone et al. 1993 |
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| Methanolobus |
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?M. bombayensis Kadam et al. 1994 |
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?M. psychrophilus ♠ Zhang et al. 2008 |
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?M. tindarius König and Stetter 1983 (type sp.) |
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M. zinderi Doerfert et al. 2009 |
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M. oregonensis (Liu et al. 1990) Boone 2002 |
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M. taylorii Oremland and Boone 1994 |
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M. profundi Mochimaru et al. 2009 |
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M. vulcani Stetter et al. 1989 emend. Kadam and Boone 1995 |
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Notes:
♠ Strains found at the National Center for Biotechnology Information (NCBI) but not listed in the List of Prokaryotic names with Standing in Nomenclature (LPSN)
♦ Type strain lost or not available
References
Further reading
Scientific journals
- Cavalier-Smith, T (2002). "The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification". Int. J. Syst. Evol. Microbiol. 52 (Pt 1): 7–76. PMID 11837318.
- Springer E, Sachs MS, Woese CR, Boone DR (1995). "Partial gene sequences for the A subunit of methyl-coenzyme M reductase (mcrI) as a phylogenetic tool for the family Methanosarcinaceae". Int. J. Syst. Bacteriol. 45 (3): 554–559. doi:10.1099/00207713-45-3-554. PMID 8590683.
- Sowers KR, Johnson JL, Ferry JG (1984). "Phylogenic relationships among the methylotrophic methane-producing bacteria and emendation of the family Methanosarcinaceae". Int. J. Syst. Bacteriol. 34 (4): 444–450. doi:10.1099/00207713-34-4-444.
Scientific books
- Boone DR, Whitman WB, Koga Y (2001). "Order III. Methanosarcinales ord. nov.". In DR Boone and RW Castenholz, eds. Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria (2nd ed.). New York: Springer Verlag. p. 169. ISBN 978-0-387-98771-2.
- Grant WD, Kamekura M, McGenity TJ, Ventosa A (2001). "Class III. Halobacteria class. nov.". In DR Boone and RW Castenholz, eds. Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria (2nd ed.). New York: Springer Verlag. p. 169. ISBN 978-0-387-98771-2.
Scientific databases
External links
