Caldicellulosiruptor

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Caldicellulosiruptor
Scientific classification
Kingdom:	Bacteria
Phylum:	Firmicutes
Class:	Clostridia Rainey 2010
Order:	Thermoanaerobacteriales Wiegel 2010
Family:	Thermoanaerobacterales Family III
Genus:	Caldicellulosiruptor Rainey et al. 1994 emend. Onyenwoke et al. 2006
Species
Caldicellulosiruptor acetigenus (Nielsen et al. 1994) Onyenwoke et al. 2006 Caldicellulosiruptor bescii Yang et al. 2010 Caldicellulosiruptor hydrothermalis Miroshnichenko et al. 2008 Caldicellulosiruptor kristjanssonii Bredholt et al. 1999 Caldicellulosiruptor kronotskiensis Miroshnichenko et al. 2008 Caldicellulosiruptor lactoaceticus Mladenovska et al. 1997 Caldicellulosiruptor obsidiansis ♠ Hamilton-Brehm et al. 2010 Caldicellulosiruptor owensensis Huang et al. 1998 Caldicellulosiruptor saccharolyticus Rainey et al. 1995

Caldicellulosiruptor is an genus of thermophilic, anaerobic, Gram-positive, non-spore forming bacteria. Originally placed within the highly polyphyletic class Clostridia, order Thermoanaerobacterales and family Thermoanaerobacterales Family III according to the NCBI and LPSN, it is now thought to lie outside of the Firmicutes.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) ^[1] and National Center for Biotechnology Information (NCBI)^[2] and the phylogeny is based on 16S rRNA-based LTP release 111 by The All-Species Living Tree Project ^[3]

?C. obsidiansis ♠ Hamilton-Brehm et al. 2010

C. kronotskiensis Miroshnichenko et al. 2008

C. bescii Yang et al. 2010

C. hydrothermalis Miroshnichenko et al. 2008

C. owensensis Huang et al. 1998

C. saccharolyticus Rainey et al. 1995 (type sp.)

C. lactoaceticus Mladenovska et al. 1997

	C. acetigenus (Nielsen et al. 1994) Onyenwoke et al. 2006

	C. kristjanssonii Bredholt et al. 1999

Notes:
♠ Strains found at the National Center for Biotechnology Information (NCBI) but not listed in the List of Prokaryotic names with Standing in Nomenclature (LSPN).

References

↑ J.P. Euzéby. "Caldicellulosiruptor". List of Prokaryotic names with Standing in Nomenclature (LPSN) . Retrieved 2013-03-20.
↑ Sayers et al. "Caldicellulosiruptor". National Center for Biotechnology Information (NCBI) taxonomy database . Retrieved 2013-03-20.
↑ All-Species Living Tree Project."16S rRNA-based LTP release 111 (full tree)". Silva Comprehensive Ribosomal RNA Database . Retrieved 2013-03-20.

Prokaryotes: Bacteria classification (phyla and orders)

Domain: Archaea; Bacteria; Eukaryota
(Kingdom: Plant; Hacrobia; Heterokont; Alveolata; Rhizaria; Excavata; Amoebozoa; Animal; Fungi)

G-/
OM

Terra-/
Glidobacteria
(BV1)

Eobacteria	Deinococcus-Thermus Deinococcales Thermales Chloroflexi Anaerolineales Caldilineales Chloroflexales Herpetosiphonales Dehalococcoidales Ktedonobacterales Thermogemmatisporales Thermomicrobiales Sphaerobacterales

other glidobacteria	Thermodesulfobacteria thermophiles Aquificae Thermotogae Cyanobacteria

Proteobacteria
(BV2)

Alpha	Caulobacterales Kiloniellales Kordiimonadales Magnetococcales Parvularculales Rhizobiales Rhodobacterales Rhodospirillales Rickettsiales Sneathiellales Sphingomonadales

Beta	Burkholderiales Hydrogenophilales Methylophilales Neisseriales Nitrosomonadales Procabacteriales Rhodocyclales

Gamma	Acidithiobacillales Aeromonadales Alteromonadales Cardiobacteriales Chromatiales Enterobacteriales Legionellales Methylococcales Oceanospirillales Orbales Pasteurellales Pseudomonadales Salinisphaerales Thiotrichales Vibrionales Xanthomonadales

Delta	Bdellovibrionales Desulfarculales Desulfobacterales Desulfovibrionales Desulfurellales Desulfuromonadales Myxococcales Syntrophobacterales Syntrophorhabdales

Epsilon	Campylobacterales Nautiliales

Zeta	Mariprofundales

BV4

Spirochaetes	Spirochaetes

Sphingobacteria (FCB group)	Fibrobacteres Chlorobi Chlorobiales Ignavibacteriales Bacteroidetes Bacteroidales Cytophagales Flavobacteriales Sphingobacteriales

Planctobacteria/ (PVC group)	Chlamydiae Lentisphaerae Lentisphaerales Oligosphaerales Victivallales Planctomycetes Phycisphaerales Planctomycetales Verrucomicrobia Puniceicoccales Opitutales Chthoniobacterales Verrucomicrobiales "Poribacteria"

Other GN	Acidobacteria Acidobacteriales Acanthopleuribacterales Holophagales Solibacterales Armatimonadetes Armatimonadales Chthonomonadales Fimbriimonadales Caldiserica Chrysiogenetes Deferribacteres Dictyoglomi Elusimicrobia Fusobacteria Gemmatimonadetes Nitrospirae Synergistetes

G+/
no OM

Firmicutes
(BV3)

Bacilli	Bacillales Lactobacillales

Clostridia	Clostridiales Halanaerobiales Thermoanaerobacterales Natranaerobiales

Erysipelotrichi	Erysipelotrichiales

Thermolithobacteria	Thermolithobacterales

Tenericutes/ Mollicutes	Mycoplasmatales Entomoplasmatales Anaeroplasmatales Acholeplasmatales Haloplasmatales

Negativicutes	Selenomonadales

Actinobacteria
(BV5)

Actinomycetidae	Actinomycetales Bifidobacteriales

Acidimicrobiidae	Acidimicrobiales

Coriobacteriidae	Coriobacteriales

Nitriliruptoridae	Euzebyales Nitriliruptorales

Rubrobacteridae	Gaiellales Rubrobacterales Thermoleophilales Solirubrobacterales

M: BAC

bact (clas)

gr+f/gr+a (t)/gr-p (c)/gr-o

drug (J1p, w, n, m, vacc)

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