Caenorhabditis

Caenorhabditis
Caenorhabditis elegans
Scientific classification
Kingdom: Animalia
Phylum: Nematoda
Class: Secernentea
Order: Rhabditida
Family: Rhabditidae
Genus: Caenorhabditis

Caenorhabditis is a genus of nematodes which live in bacteria-rich environments like compost piles and decaying dead animals. It contains the noted model organism Caenorhabditis elegans and several other species for which a genome sequence is either available or currently being determined. The two most-studied species in this genus (C. elegans and C. briggsae) are both hermaphrodites whereas all other species are gonochoristic (they have male and female sexes).[1]

Ecology

Caenorhabditis occupy various nutrient and bacteria rich environments. They do not form self-sustaining populations in soil, as it lacks enough organic matter. Juvenile worms (dauer larvae) can be transported by invertebrates including millipedes, insects, isopods, and gastropods. Some species also appear to be associated with vertebrates including zebu cattle, although the nature of this association is not clear. The species can be classified as phoretic or necromenic based on their relationship to their invertebrate host. A phoretic worm rides on the host until it finds a favorable environment, and then leaves. A necromenic worm waits for the host to die, and lives on the bacteria which thrive in the dead animal. Many species are capable of both phoretic and necromenic lifestyles.[2]

Species

Known species in this genus include:

References

  1. ^ Haag, Eric S.. "The evolution of nematode sex determination: C. elegans as a reference point for comparative biology". WormBook. http://www.wormbook.org/chapters/www_evolutionsexdetermin/evolutionsexdetermin.html. 
  2. ^ Kiontke, K; Sudhaus, W (Jan 2006). "Ecology of Caenorhabditis species." (Free full text). WormBook : the online review of C. Elegans biology: 1–14. doi:10.1895/wormbook.1.37.1. PMID 18050464 
  3. ^ The C. elegans Sequencing Consortium (1998). "Genome sequence of the nematode C. elegans: a platform for investigating biology". Science 282 (5396): 2012–2018. doi:10.1126/science.282.5396.2012. PMID 9851916. http://www.sciencemag.org/cgi/content/abstract/282/5396/2012?maxtoshow=&HITS=10&hits=10&RESULTFORMAT=&searchid=1&FIRSTINDEX=0&volume=282&firstpage=2012&resourcetype=HWCIT. 
  4. ^ Stein, L. D. et al. (2003). "The Genome Sequence of Caenorhabditis briggsae: A Platform for Comparative Genomics". PLoS Biology 1 (2): 166–192. doi:10.1371/journal.pbio.0000045. PMC 261899. PMID 14624247. http://biology.plosjournals.org/perlserv/?request=get-document&doi=10.1371/journal.pbio.0000045. 
  5. ^ GSC: Caenorhabditis remanei
  6. ^ GSC: Caenorhabditis n. sp. PB2801
  7. ^ GSC: Caenorhabditis japonica
  8. ^ Mortazavi, A.; Schwarz, E. M.; Williams, B.; Schaeffer, L.; Antoshechkin, I.; Wold, B. J.; Sternberg, P. W. (2010). "Scaffolding a Caenorhabditis nematode genome with RNA-seq". Genome Research 20 (12): 1740–1747. doi:10.1101/gr.111021.110. PMC 2990000. PMID 20980554. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2990000.  edit