Germination is the process whereby growth emerges from a period of dormancy. The most common example of germination is the sprouting of a seedling from a seed of an angiosperm or gymnosperm. However, the growth of a sporeling from a spore, for example the growth of hyphae from fungal spores, is also germination. In a more general sense, germination can imply anything expanding into greater being from a small existence or germ.
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Germination is the growth of an embryonic plant contained within a seed, it results in the formation of the seedling. The seed of a higher plant is a small package produced in a fruit or cone after the union of male and female sex cells. Most seeds go through a period of quiescences where there is no active growth, during this time the seed can be safely transported to a new location and/or survive adverse climate conditions until it is favorable for growth. The seed contains an embryo and in most plants stored food reserves wrapped in a seed coat. Under favorable conditions, the seed begins to germinate, and the embryonic tissues resume growth, developing towards a seedling.
The germination of seeds is dependent on both internal and external conditions. The most important external factors include: temperature, water, oxygen and sometimes light or darkness.[1] Different plants have seeds that require distinctive variables for successful germination. Often this depends on the individual seed variety and is closely linked to the ecological conditions of the plants' natural habitat. For some seeds, future germination responses are affected by environmental conditions during seed formation; most often these responses are types of seed dormancy.
Stratification mimics natural processes that weaken the seed coat before germination. In nature, some seeds require particular conditions to germinate, such as the heat of a fire (e.g., many Australian native plants), or soaking in a body of water for a long period of time. Others have to be passed through an animal's digestive tract to weaken the seed coat and enable germination.[1]
Many live seeds have dormancy, meaning they will not germinate even if the environment has sufficient water and warmth for the seed to germinate. Dormancy factors include conditions affecting many different parts of the seed, from the embryo to the seed coat. Dormancy is broken or ended by a number of different conditions, and is caused be internal or external and sometimes both factors. Environmental factors like light, temperature, fire, ingestion by animals, are conditions that can end seed dormancy. Internally seeds may be dormant because of plant hormones, which affect cell growth and prevents germination. One plant hormone that is a common dormancy inducing chemical is absciscic acid, while the production and application of the hormone gibberellin can break dormancy and induces seed germination. The use of hormones to end seed dormancy is used in brewing, where barley is treated with gibberellin to ensure uniform seed germination in the production of barley malt.[1]
In some definitions, the appearance of the radicle marks the end of germination and the beginning of "establishment", a period that ends when the seedling has exhausted the food reserves stored in the seed. Germination and establishment as an independent organism are critical phases in the life of a plant when they are the most vulnerable to injury, disease, and water stress.[1] The germination index can be used as an indicator of phytotoxicity in soils. The mortality between dispersal of seeds and completion of establishment can be so high, that many species survive only by producing huge numbers of seeds.
In agriculture and gardening, germination rate is the number of seeds of a particular plant species, variety or particular seedlot that are likely to germinate. This is usually expressed as a percentage, e.g. an 85% germination rate indicates that about 85 out of 100 seeds will probably germinate under proper conditions. Germination rate is useful in calculating seed requirements for a given area or desired number of plants.
The part of the plant that emerges from the seed first is the embryonic root, termed radicle or primary root. This allows the seedling to become anchored in the ground and start absorbing water. After the root absorbs water, the embryonic shoot emerges from the seed. The shoot comprises three main parts: the cotyledons (seed leaves), the section of shoot below the cotyledons (hypocotyl), and the section of shoot above the cotyledons (epicotyl). The way the shoot emerges differs between plant groups.[1]
In epigeous (or epigeal) germination, the hypocotyl elongates and forms a hook, pulling rather than pushing the cotyledons and apical meristem through the soil. Once it reaches the surface, it straightens and pulls the cotyledons and shoot tip of the growing seedlings into the air. Beans, tamarind, and papaya are examples of plant that germinate this way.[1]
Another way of germination is hypogeous (or hypogeal) where the epicotyl elongates and forms the hook. In this type of germination, the cotyledons stay underground where they eventually decompose. Peas, for example, germinate this way.[1]
In monocot seeds, the embryo's radicle and cotyledon are covered by a coleorhiza and coleoptile, respectively. The coleorhiza is the first part to grow out of the seed, followed by the radicle. The coleoptile is then pushed up through the ground until it reaches the surface. There, it stops elongating and the first leaves emerge through an opening as it is.[1]
While not a class of germination, this refers to germination of the seed occurring inside the fruit before it has begun to decay. The seeds of the green apple commonly germinate in this manner.
Another germination event during the life cycle of gymnosperms and flowering plants is the germination of a pollen grain after pollination. Like seeds, pollen grains are severely dehydrated before being released to facilitate their dispersal from one plant to another. They consist of a protective coat containing several cells (up to 8 in gymnosperms, 2-3 in flowering plants). One of these cells is a tube cell. Once the pollen grain lands on the stigma of a receptive flower (or a female cone in gymnosperms), it takes up water and germinates. Pollen germination is facilitated by hydration on the stigma, as well as the structure and physiology of the stigma and style.[1] Pollen can also be induced to germinate in vitro (in a petri dish or test tube).[3][4]
During germination, the tube cell elongates into a pollen tube. In the flower, the pollen tube then grows towards the ovule where it discharges the sperm produced in the pollen grain for fertilization. The germinated pollen grain with its two sperm cells is the mature male microgametophyte of these plants.[1]
Since most plants carry both male and female reproductive organs in their flowers, there is a high risk for self-pollination and thus inbreeding. Some plants use the control of pollen germination as a way to prevent this selfing. Germination and growth of the pollen tube involve molecular signaling between stigma and pollen. In self-incompatibility in plants, the stigma of certain plants can molecularly recognize pollen from the same plant and prevents it from germinating.[5]
Germination can also refer to the emergence of cells from resting spores and the growth of sporeling hyphae or thalli from spores in fungi, algae, and some plants.
Conidia are the asexual reproductive spores of fungi, which germinate under specific conditions. From the germinating conidia different cells are formed. The most common one is the germ tube. The germ tube will grow and developed into the hyphae. During germination, conidial may produce conidial anastomosis tubes, those are different from conidial anastomosis tubes because they are thinner, shorter, lack branches, exhibit determinate growth, and home toward each other. Both cells have a tubular shape, but the conidial anastomosis form a bridge that allows fusion between conidia. [6][7]
In resting spores, germination involves cracking the thick cell wall of the dormant spore. For example, in zygomycetes the thick-walled zygosporangium cracks open and the zygospore inside gives rise to the emerging sporangiophore. In slime molds, germination refers to the emergence of amoeboid cells from the hardened spore. After cracking the spore coat, further development involves cell division, but not necessarily the development of a multicellular organism (for example in the free-living amoebas of slime molds).[1]
In motile zoospores, germination frequently means a lack of motility and changes in cell shape, which allow the organism to become sessile.[1]
In plants such as bryophytes, ferns, and a few others, spores germinate into independent gametophytes. In the bryophytes (e.g. mosses and liverworts), spores germinate into protonemata, similar to fungal hyphae, from which the gametophyte grows. In ferns, the gametophytes are small, heart-shaped prothalli that can often be found underneath a spore-shedding adult plant.[1]