- Upogebia acanthochela
- Upogebia acanthops
- Upogebia acanthura (Coêlho, 1973)
- Upogebia acutispina
- Upogebia aestuari Williams, 1993
- Upogebia affinis (Say, 1818) — coastal mud shrimp
- Upogebia africana
- Upogebia alaini
- Upogebia allobranchus
- Upogebia amboinensis
- Upogebia anacanthus
- Upogebia ancylodactyla
- Upogebia annae Thistle, 1973
- Upogebia aquilina A. B. Williams, 1993
- Upogebia australis
- Upogebia baldwini
- Upogebia balmaorum
- Upogebia barbata
- Upogebia baweana
- Upogebia bermudensis Williams, 1993
- Upogebia borradailei
- Upogebia bowerbanki
- Upogebia brasiliensis Holthuis, 1956
- Upogebia bruscai
- Upogebia burkenroadi
- Upogebia capensis (Krauss, 1843) — Cape mud shrimp
- Upogebia careospina Williams, 1993
- Upogebia cargadensis
- Upogebia carinicauda
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- Upogebia casis Williams, 1993
- Upogebia ceratophora
- Upogebia cocosia
- Upogebia contigua
- Upogebia corallifora Williams and Scott, 1989
- Upogebia cortesi
- Upogebia danai
- Upogebia darwinii
- Upogebia dawsoni
- Upogebia deltaura (Leach, 1815)
- Upogebia demani
- Upogebia dromana
- Upogebia edentata
- Upogebia edulis
- Upogebia fallax
- Upogebia felderi A. B. Williams, 1993
- Upogebia fijiensis
- Upogebia foresti
- Upogebia galapagensis
- Upogebia giralia
- Upogebia gracilis
- Upogebia guddusiae
- Upogebia heterocheira
- Upogebia hexaceras
- Upogebia hirtifrons
- Upogebia holthuisi
- Upogebia imperfecta
- Upogebia inomissa A. B. Williams, 1993
- Upogebia issaeffi
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- Upogebia jamaicensis Thistle, 1973
- Upogebia jonesi
- Upogebia kempi
- Upogebia kiiensis
- Upogebia kuebenthali
- Upogebia kyusyuensis
- Upogebia laemanu
- Upogebia lenzrichtersi
- Upogebia lepta A. B. Williams, 1986
- Upogebia lincolni
- Upogebia longicauda
- Upogebia maccraryae
- Upogebia macginitieorum A. B. Williams, 1986
- Upogebia major (De Haan, 1841) — Japanese mud shrimp
- Upogebia marina Coêlho, 1973
- Upogebia molipollex Williams, 1993
- Upogebia noronhensis Fausto-Filho, 1969
- Upogebia omissa Gomes Corrêa, 1968
- Upogebia omissago Williams, 1993
- Upogebia onychion A. B. Williams, 1986
- Upogebia paraffinis Williams, 1993
- Upogebia pillsbury Williams, 1993
- Upogebia pugettensis (Dana, 1852) — blue mud shrimp
- Upogebia pusilla (Petagna, 1792) — Mediterranean mud shrimp
- Upogebia rupicola Komai, 2005
- Upogebia spinistipula A. B. Williams and Heard, 1991
- Upogebia stellata (Montagu, 1808)
- Upogebia vasquezi Ngoc-Ho, 1989
- Upogebia wuhsienweni Yu, 1931 — Chinese mud shrimp
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