U1A polyadenylation inhibition element (PIE)

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U1A polyadenylation inhibition element (PIE)
Template:Abbreviation
Type: Cis-reg;
2° structure: Published; PubMed
Seed alignment: PubMed
Avg length: 74.0 nucleotides
Avg identity: 80%

The U1A polyadenylation inhibition element (PIE) is an RNA element which is responsible for the regulation of the length of the polyA tail of the U1A protein pre-mRNA. The PIE is located in the U1A mRNA 3' UTR. PIE adopts a U-shaped structure, with binding sites for a single U1A protein at each bend and when complexed with the two proteins it blocks activity of poly(A) polymerase (PAP), and inhibits its activity.[1] [2]

[edit] References

  1. ^ Clerte, C; Hall KB (2004). "Global and Local Dynamics of the U1A Polyadenylation Inhibition Element (PIE) RNA and PIE RNA-U1A Complexes". Biochemistry 43: 13404–13415. doi:10.1021/bi049117g. PMID 15491147. 
  2. ^ Varani, L; Gunderson SI, Mattaj IW, Kay LE, Neuhaus D, Varani G (2000). "The NMR structure of the 38 kDa U1A protein - PIE RNA complex reveals the basis of cooperativity in regulation of polyadenylation by human U1A protein". Nat Struct Biol 7: 329–335. doi:10.1038/74101. PMID 10742179. 

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