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| Pseudomonas sRNA P9 |
 |
| Type: |
Gene; |
| 2° structure: |
INFERNAL |
| Seed alignment: |
Predicted; RNAalifold; |
| Avg length: |
124.4 nucleotides |
| Avg identity: |
66% |
|
Pseudomonas sRNA P9 is a ncRNA that was predicted using bioinformatic tools in the genome of the opportunistic pathogen Pseudomonas aeruginosa and its expression verified by northern blot analysis [1]. P9 appears to be conserved in several Pseudomonas species in addition to Bordetella species. In both Pseudomonas and Bordetella species P9 appears to be located upstream of a predicted threonine dehydratase gene. P9 has a predicted Rho independent terminator at the 3' end but the function of P9 is unknown [1]
[edit] References
- ^ a b Livny J, Brencic A, Lory S, Waldor MK (2006). "Identification of 17 Pseudomonas aeruginosa sRNAs and prediction of sRNA-encoding genes in 10 diverse pathogens using the bioinformatic tool sRNAPredict2". Nucleic Acids Res. 34 (12): 3484–93. doi:10.1093/nar/gkl453. PMID 16870723.
[edit] External links
