HDLBP

From Wikipedia, the free encyclopedia

High density lipoprotein binding protein (vigilin)

PDB rendering based on 1vig.

Available structures: 1vig, 1vih, 2cte, 2ctf, 2ctj, 2ctk, 2ctl, 2ctm

Identifiers

Symbol(s)

HDLBP; HBP; FLJ16432; VGL

External IDs

OMIM: 142695 MGI: 99256 HomoloGene: 38035

Gene ontology
Molecular Function:	• RNA binding • lipid transporter activity • lipid binding
Cellular Component:	• nucleus • plasma membrane
Biological Process:	• lipid metabolic process • lipid transport • steroid metabolic process • cholesterol metabolic process

RNA expression pattern

More reference expression data

Orthologs

Human

Mouse

Refseq

NM_005336 (mRNA)
NP_005327 (protein)

NM_133808 (mRNA)
NP_598569 (protein)

Location

Chr 2: 241.82 - 241.9 Mb

Chr 1: 95.24 - 95.31 Mb

Pubmed search

[1]

[2]

High density lipoprotein binding protein (vigilin), also known as HDLBP, is a human gene.^[1]

High density lipoprotein-binding protein, also known as vigilin, is a 110-kD protein that specifically binds HDL molecules and may function in the removal of excess cellular cholesterol.[supplied by OMIM]^[1]

[edit] References

^ ^a ^b Entrez Gene: HDLBP high density lipoprotein binding protein (vigilin).

[edit] Further reading

Anderson NL, Anderson NG (2003). "The human plasma proteome: history, character, and diagnostic prospects.". Mol. Cell Proteomics 1 (11): 845–67. PMID 12488461.
McKnight GL, Reasoner J, Gilbert T, et al. (1992). "Cloning and expression of a cellular high density lipoprotein-binding protein that is up-regulated by cholesterol loading of cells.". J. Biol. Chem. 267 (17): 12131–41. PMID 1318310.
Graham DL, Oram JF (1987). "Identification and characterization of a high density lipoprotein-binding protein in cell membranes by ligand blotting.". J. Biol. Chem. 262 (16): 7439–42. PMID 3034894.
Plenz G, Kügler S, Schnittger S, et al. (1994). "The human vigilin gene: identification, chromosomal localization and expression pattern.". Hum. Genet. 93 (5): 575–82. PMID 8168838.
Xia YR, Klisak I, Sparkes RS, et al. (1993). "Localization of the gene for high-density lipoprotein binding protein (HDLBP) to human chromosome 2q37.". Genomics 16 (2): 524–5. doi:10.1006/geno.1993.1221. PMID 8390966.
Neu-Yilik G, Zorbas H, Gloe TR, et al. (1993). "Vigilin is a cytoplasmic protein. A study on its expression in primary cells and in established cell lines of different species.". Eur. J. Biochem. 213 (2): 727–36. PMID 8477745.
Kügler S, Grünweller A, Probst C, et al. (1996). "Vigilin contains a functional nuclear localisation sequence and is present in both the cytoplasm and the nucleus.". FEBS Lett. 382 (3): 330–4. PMID 8605996.
Kügler S, Plenz G, Müller PK (1996). "Two additional 5' exons in the human Vigilin gene distinguish it from the chicken gene and provide the structural basis for differential routes of gene expression.". Eur. J. Biochem. 238 (2): 410–7. PMID 8681952.
Chiu DS, Oram JF, LeBoeuf RC, et al. (1998). "High-density lipoprotein-binding protein (HBP)/vigilin is expressed in human atherosclerotic lesions and colocalizes with apolipoprotein E.". Arterioscler. Thromb. Vasc. Biol. 17 (11): 2350–8. PMID 9409201.
Kruse C, Willkomm DK, Grünweller A, et al. (2000). "Export and transport of tRNA are coupled to a multi-protein complex.". Biochem. J. 346 Pt 1: 107–15. PMID 10657246.
Bocharov AV, Vishnyakova TG, Baranova IN, et al. (2001). "Characterization of a 95 kDa high affinity human high density lipoprotein-binding protein.". Biochemistry 40 (14): 4407–16. PMID 11284697.
Wistow G, Bernstein SL, Ray S, et al. (2002). "Expressed sequence tag analysis of adult human iris for the NEIBank Project: steroid-response factors and similarities with retinal pigment epithelium.". Mol. Vis. 8: 185–95. PMID 12107412.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMID 12477932.
Adkins JN, Varnum SM, Auberry KJ, et al. (2003). "Toward a human blood serum proteome: analysis by multidimensional separation coupled with mass spectrometry.". Mol. Cell Proteomics 1 (12): 947–55. PMID 12543931.
Goolsby KM, Shapiro DJ (2003). "RNAi-mediated depletion of the 15 KH domain protein, vigilin, induces death of dividing and non-dividing human cells but does not initially inhibit protein synthesis.". Nucleic Acids Res. 31 (19): 5644–53. PMID 14500828.
Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs.". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
Vollbrandt T, Willkomm D, Stossberg H, Kruse C (2004). "Vigilin is co-localized with 80S ribosomes and binds to the ribosomal complex through its C-terminal domain.". Int. J. Biochem. Cell Biol. 36 (7): 1306–18. doi:10.1016/j.biocel.2003.11.006. PMID 15109574.
Colland F, Jacq X, Trouplin V, et al. (2004). "Functional proteomics mapping of a human signaling pathway.". Genome Res. 14 (7): 1324–32. doi:10.1101/gr.2334104. PMID 15231748.
Beausoleil SA, Jedrychowski M, Schwartz D, et al. (2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins.". Proc. Natl. Acad. Sci. U.S.A. 101 (33): 12130–5. doi:10.1073/pnas.0404720101. PMID 15302935.