CSDE1

From Wikipedia, the free encyclopedia


Cold shock domain containing E1, RNA-binding
PDB rendering based on 1wfq.
Available structures: 1wfq, 1x65
Identifiers
Symbol(s) CSDE1; UNR; D1S155E; DKFZp779B0247; DKFZp779J1455; FLJ26882; RP5-1000E10.3
External IDs OMIM: 191510 MGI: 92356 HomoloGene: 5179
Orthologs
Human Mouse
Entrez 7812 229663


Refseq NM_001007553 (mRNA)
NP_001007554 (protein)		 NM_144901 (mRNA)
NP_659150 (protein)
Pubmed search [1] [2]

Cold shock domain containing E1, RNA-binding, also known as CSDE1, is a human gene.[1]


[edit] References

  1. ^ Entrez Gene: CSDE1 cold shock domain containing E1, RNA-binding.

[edit] Further reading

  • Nicolaiew N, Triqueneaux G, Dautry F (1991). "Organization of the human N-ras locus: characterization of a gene located immediately upstream of N-ras.". Oncogene 6 (5): 721–30. PMID 2052355. 
  • Jeffers M, Paciucci R, Pellicer A (1990). "Characterization of unr; a gene closely linked to N-ras.". Nucleic Acids Res. 18 (16): 4891–9. PMID 2204029. 
  • Boussadia O, Jacquemin-Sablon H, Dautry F (1993). "Exon skipping in the expression of the gene immediately upstream of N-ras (unr/NRU).". Biochim. Biophys. Acta 1172 (1-2): 64–72. PMID 8439573. 
  • Andersson B, Wentland MA, Ricafrente JY, et al. (1996). "A "double adaptor" method for improved shotgun library construction.". Anal. Biochem. 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474. 
  • Yu W, Andersson B, Worley KC, et al. (1997). "Large-scale concatenation cDNA sequencing.". Genome Res. 7 (4): 353–8. PMID 9110174. 
  • Nagase T, Ishikawa K, Suyama M, et al. (1999). "Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.". DNA Res. 5 (6): 355–64. PMID 10048485. 
  • Hunt SL, Hsuan JJ, Totty N, Jackson RJ (1999). "unr, a cellular cytoplasmic RNA-binding protein with five cold-shock domains, is required for internal initiation of translation of human rhinovirus RNA.". Genes Dev. 13 (4): 437–48. PMID 10049359. 
  • Grosset C, Chen CY, Xu N, et al. (2000). "A mechanism for translationally coupled mRNA turnover: interaction between the poly(A) tail and a c-fos RNA coding determinant via a protein complex.". Cell 103 (1): 29–40. PMID 11051545. 
  • Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination.". Genome Res. 10 (11): 1788–95. PMID 11076863. 
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMID 12477932. 
  • Mitchell SA, Spriggs KA, Coldwell MJ, et al. (2003). "The Apaf-1 internal ribosome entry segment attains the correct structural conformation for function via interactions with PTB and unr.". Mol. Cell 11 (3): 757–71. PMID 12667457. 
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs.". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039. 
  • Chang TC, Yamashita A, Chen CY, et al. (2004). "UNR, a new partner of poly(A)-binding protein, plays a key role in translationally coupled mRNA turnover mediated by the c-fos major coding-region determinant.". Genes Dev. 18 (16): 2010–23. doi:10.1101/gad.1219104. PMID 15314026. 
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMID 15489334. 
  • Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline.". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMID 15489336. 
  • Cornelis S, Tinton SA, Schepens B, et al. (2005). "UNR translation can be driven by an IRES element that is negatively regulated by polypyrimidine tract binding protein.". Nucleic Acids Res. 33 (10): 3095–108. doi:10.1093/nar/gki611. PMID 15928332. 
  • Patel GP, Ma S, Bag J (2006). "The autoregulatory translational control element of poly(A)-binding protein mRNA forms a heteromeric ribonucleoprotein complex.". Nucleic Acids Res. 33 (22): 7074–89. doi:10.1093/nar/gki1014. PMID 16356927. 
  • Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006.". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMID 16381901. 
  • Gregory SG, Barlow KF, McLay KE, et al. (2006). "The DNA sequence and biological annotation of human chromosome 1.". Nature 441 (7091): 315–21. doi:10.1038/nature04727. PMID 16710414. 
  • Olsen JV, Blagoev B, Gnad F, et al. (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.". Cell 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983. 
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