CSDC2

From Wikipedia, the free encyclopedia

Cold shock domain containing C2, RNA binding

Identifiers

CSDC2; PIPPIN; dJ347H13.2

External IDs

Gene ontology
Molecular Function:	• DNA binding • RNA binding
Cellular Component:	• nucleus • cytoplasm
Biological Process:	• regulation of transcription, DNA-dependent • mRNA processing • histone mRNA 3'-end processing

RNA expression pattern

More reference expression data

Orthologs

Human

Mouse

Refseq

NM_014460 (mRNA)
NP_055275 (protein)

NM_145473 (mRNA)
NP_663448 (protein)

Location

Chr 22: 40.29 - 40.3 Mb

Chr 15: 81.76 - 81.78 Mb

Pubmed search

[1]

[2]

Cold shock domain containing C2, RNA binding, also known as CSDC2, is a human gene.^[1]

[edit] References

^ Entrez Gene: CSDC2 cold shock domain containing C2, RNA binding.

[edit] Further reading

Castiglia D, Scaturro M, Nastasi T, et al. (1996). "PIPPin, a putative RNA-binding protein specifically expressed in the rat brain.". Biochem. Biophys. Res. Commun. 218 (1): 390–4. doi:10.1006/bbrc.1996.0068. PMID 8573167.
Andersson B, Wentland MA, Ricafrente JY, et al. (1996). "A "double adaptor" method for improved shotgun library construction.". Anal. Biochem. 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474.
Yu W, Andersson B, Worley KC, et al. (1997). "Large-scale concatenation cDNA sequencing.". Genome Res. 7 (4): 353–8. PMID 9110174.
Nastasi T, Scaturro M, Bellafiore M, et al. (1999). "PIPPin is a brain-specific protein that contains a cold-shock domain and binds specifically to H1 degrees and H3.3 mRNAs.". J. Biol. Chem. 274 (34): 24087–93. PMID 10446180.
Dunham I, Shimizu N, Roe BA, et al. (1999). "The DNA sequence of human chromosome 22.". Nature 402 (6761): 489–95. doi:10.1038/990031. PMID 10591208.
Nastasi T, Muzi P, Beccari S, et al. (2001). "Specific neurons of brain cortex and cerebellum are PIPPin positive.". Neuroreport 11 (10): 2233–6. PMID 10923677.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMID 12477932.
Raimondi L, D'Asaro M, Proia P, et al. (2003). "RNA-binding ability of PIPPin requires the entire protein.". J. Cell. Mol. Med. 7 (1): 35–42. PMID 12767259.
Schäfer C, Steffen H, Krzykowski KJ, et al. (2003). "CRHSP-24 phosphorylation is regulated by multiple signaling pathways in pancreatic acinar cells.". Am. J. Physiol. Gastrointest. Liver Physiol. 285 (4): G726–34. doi:10.1152/ajpgi.00111.2003. PMID 12801884.
Collins JE, Wright CL, Edwards CA, et al. (2005). "A genome annotation-driven approach to cloning the human ORFeome.". Genome Biol. 5 (10): R84. doi:10.1186/gb-2004-5-10-r84. PMID 15461802.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMID 15489334.
Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes.". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMID 16344560.