Chondroitin B lyase
From Wikipedia, the free encyclopedia
In enzymology, a chondroitin B lyase (EC 4.2.2.19) is an enzyme that catalyzes the chemical reaction
- Eliminative cleavage of dermatan sulfate containing 1,4-beta-D-hexosaminyl and 1,3-beta-D-glucurosonyl or 1,3-alpha-L-iduronosyl linkages to disaccharides containing 4-deoxy-beta-D-gluc-4-enuronosyl groups to yield a 4,5-unsaturated dermatan-sulfate disaccharide (deltaUA-GalNAc-4S).
This enzyme belongs to the family of lyases, specifically those carbon-oxygen lyases acting on polysaccharides. The systematic name of this enzyme class is chondroitin B lyase. Other names in common use include chondroitinase B, ChonB, and ChnB.
[edit] References
- IUBMB entry for 4.2.2.19
- BRENDA references for 4.2.2.19 (Recommended.)
- PubMed references for 4.2.2.19
- PubMed Central references for 4.2.2.19
- Google Scholar references for 4.2.2.19
- Gu K, Linhardt RJ, Laliberte M, Gu K, Zimmermann J (Pt 2). "Purification, characterization and specificity of chondroitin lyases and glycuronidase from Flavobacterium heparinum". Biochem. J. 312: 569–77. PMID 8526872.
- Pojasek K, Raman R, Kiley P, Venkataraman G, Sasisekharan R (2002). "Biochemical characterization of the chondroitinase B active site". J. Biol. Chem. 277: 31179–86. doi: . PMID 12063249.
- Pojasek K, Shriver Z, Kiley P, Venkataraman G, Sasisekharan R (2001). "Recombinant expression, purification, and kinetic characterization of chondroitinase AC and chondroitinase B from Flavobacterium heparinum". Biochem. Biophys. Res. Commun. 286: 343–51. doi: . PMID 11500043.
- Suzuki K, Terasaki Y, Uyeda M (2002). "Inhibition of hyaluronidases and chondroitinases by fatty acids". J. Enzyme. Inhib. Med. Chem. 17: 183–6. doi: . PMID 12443044.
- Ototani N, Yosizawa Z (1979). "Purification of chondroitinase B and chondroitinase C using glycosaminoglycan-bound AH-Sepharose 4B". Carbohydr. Res. 70: 295–306. doi: . PMID 427837.
- K, Zimmermann JJ, Su H (2000). "Isolation and expression in Escherichia coli of cslA and cslB, genes coding for the chondroitin sulfate-degrading enzymes chondroitinase AC and chondroitinase B, respectively, from Flavobacterium heparinum". Appl. Environ. Microbiol. 66: 29–35. PMID 10618199.
- V, Sasisekharan R, Cygler M (2004). "The structure of chondroitin B lyase complexed with glycosaminoglycan oligosaccharides unravels a calcium-dependent catalytic machinery". J. Biol. Chem. 279: 32882–96. doi: . PMID 15155751.
- Li Y, Matte A, Su H, Cygler M (1999). "Crystallization and preliminary X-ray analysis of chondroitinase B from Flavobacterium heparinum". Acta. Crystallogr. D. Biol. Crystallogr. 55: 1055–7. doi: . PMID 10216304.
- Huang W, Matte A, Li Y, Kim YS, Linhardt RJ, Su H, Cygler M (1999). "Crystal structure of chondroitinase B from Flavobacterium heparinum and its complex with a disaccharide product at 1.7 A resolution". J. Mol. Biol. 294: 1257–69. doi: . PMID 10600383.
- Lauder RM (2005). "Characterization of oligosaccharides from the chondroitin/dermatan sulfates. 1H-NMR and 13C-NMR studies of reduced trisaccharides and hexasaccharides". FEBS. J. 272: 6276–86. doi: . PMID 16336265.
[edit] External links
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- The CAS registry number for this enzyme class is 52227-83-5.