Independent component analysis
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Independent component analysis (ICA) is a computational method for separating a multivariate signal into additive subcomponents supposing the mutual statistical independence of the non-Gaussian source signals. It is a special case of blind source separation.
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[edit] Definition
The independence assumption is correct in most cases so the blind ICA separation of a mixed signal gives very good results. It is also used for signals that are not supposed to be generated by a mixing for analysis purposes. A simple application of ICA is the “cocktail party problem”, where the underlying speech signals are separated from a sample data consisting of people talking simultaneously in a room. Usually the problem is simplified by assuming no time delays and echoes. An important note to consider is that if N sources are present, at least N observations (i.e. microphones) are needed to get the original signals. This constitutes the square (J = D, where D is the input dimension of the data and J is the dimension of the model). Other cases of underdetermined (J < D) and overdetermined (J > D) have been investigated.
The statistical method finds the independent components (aka factors, latent variables or sources) by maximizing the statistical independence of the estimated components. Non-Gaussianity, motivated by the central limit theorem, is one method for measuring the independence of the components. Non-Gaussianity can be measured, for instance, by kurtosis or approximations of negentropy. Mutual information is another popular criteria for measuring statistical independence of signals.
Typical algorithms for ICA use centering, whitening and dimensionality reduction as preprocessing steps in order to simplify and reduce the complexity of the problem for the actual iterative algorithm. Whitening and dimension reduction can be achieved with principal component analysis or singular value decomposition. Whitening ensures that all dimensions are treated equally a priori before the algorithm is run. Algorithms for ICA include infomax, FastICA and JADE, but there are many others also.
The ICA method is not able to extract the actual number of source signals, the order of the source signals, nor the signs or the scales of the sources.
The method is important to blind signal separation and has many practical applications.
[edit] Mathematical definitions
Linear independent component analysis can be divided into noiseless and noisy cases, where noiseless ICA is a special case of noisy ICA. Nonlinear ICA should be considered as a separate case.
[edit] General definition
The data is represented by the random vector and the components as the random vector . The task is to transform the observed data x, using a linear static transformation s = Wx, into maximally independent components s measured by some function of independence.
[edit] Generative model
[edit] Linear noiseless ICA
The components xi of the observed random vector are generated as a sum of the independent components sk, :
weighted by the mixing weights ai,k.
The same generative model can be written in vectorial form as , where the observed random vector x is represented by the basis vectors . The basis vectors ak form the columns of the mixing matrix and the generative formula can be written as x = As, where .
Given the model and realizations (samples) of the random vector x, the task is to estimate both the mixing matrix A and the sources s. This is done by adaptively calculating the w vectors and setting up a cost function which either maximizes the nongaussianity of the calculated sk = (wT * x) or minimizes the mutual information. In some cases, a priori knowledge of the probability distributions of the sources can be used in the cost function.
The original sources s can be recovered by multiplying the observed signals x with the inverse of the mixing matrix W = A − 1, also known as the unmixing matrix. Here it is assumed that the mixing matrix is square (n = m).
[edit] Linear noisy ICA
With the added assumption of zero-mean and uncorrelated Gaussian noise , the ICA model takes the form x = As + n.
[edit] Nonlinear ICA
The mixing of the sources does not need to be linear. Using a nonlinear mixing function with parameters θ the nonlinear ICA model is x = f(s | θ) + n.
[edit] Identifiability
The identifiability of independent component analysis requires that:
- Only one of the sources sk can be Gaussian,
- The number of observed mixtures, m, must be at least as large as the number of estimated components n: ,
- The mixing matrix A must be of full rank.
[edit] See also
- Blind signal separation (BSS)
- Principal component analysis (PCA)
- Non-negative matrix factorization (NMF)
- Varimax rotation
- Projection pursuit
- Blind deconvolution
- Factor analysis
- Nonlinear PCA
- Redundancy reduction
[edit] External links
- What is independent component analysis? by Aapo Hyvärinen
- A Brief Introduction to Independent Component Analysis by JV Stone, 2005 (7 pages).
- Introductory chapter of the book A. Hyvärinen, J. Karhunen, E. Oja (2001). Independent Component Analysis
- FastICA as a package for Matlab, in R language, C++, and Python
- ICALAB Toolboxes for Matlab, developed at Riken
- High Performance Signal Analysis Toolkit provides C++ implementations of FastICA and Infomax
- Free software for ICA by JV Stone.
- ICA toolbox Matlab tools for ICA with Bell-Sejnowski, Molgedey-Schuster and mean field ICA. Developed at DTU.
- Demonstration of the cocktail party problem
- EEGLAB Toolbox ICA of EEG for Matlab, developed at UCSD.
- FMRLAB Toolbox ICA of fMRI for Matlab, developed at UCSD
- Discussion of ICA used in a biomedical shape-representation context